Gene : Carub.0006s1272 C. rubella v1.1
Defline:  (1 of 3) PF07223 - Protein of unknown function (DUF1421) (DUF1421) Genomic Order:  1272
Name:  ? Carub.0006s1272 Secondary Identifier:  ? PAC:39249709
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1272 0.5kb upstream 0.5kb upstream 3089 true scaffold_6: 4725327-4728415 Capsella rubella
Carub.0006s1272 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4727916-4728415 Capsella rubella
Carub.0006s1272 0.5kb downstream 0.5kb downstream 3089 true scaffold_6: 4724827-4727915 Capsella rubella
Carub.0006s1272 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4724827-4725326 Capsella rubella
Carub.0006s1272 1.0kb upstream 1.0kb upstream 3589 true scaffold_6: 4725327-4728915 Capsella rubella
Carub.0006s1272 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4727916-4728915 Capsella rubella
Carub.0006s1272 1.0kb downstream 1.0kb downstream 3589 true scaffold_6: 4724327-4727915 Capsella rubella
Carub.0006s1272 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4724327-4725326 Capsella rubella
Carub.0006s1272 2.0kb upstream 2.0kb upstream 4589 true scaffold_6: 4725327-4729915 Capsella rubella
Carub.0006s1272 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4727916-4729915 Capsella rubella
Carub.0006s1272 2.0kb downstream 2.0kb downstream 4589 true scaffold_6: 4723327-4727915 Capsella rubella
Carub.0006s1272 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4723327-4725326 Capsella rubella
Carub.0006s1272 5.0kb upstream 5.0kb upstream 7589 true scaffold_6: 4725327-4732915 Capsella rubella
Carub.0006s1272 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4727916-4732915 Capsella rubella
Carub.0006s1272 5.0kb downstream 5.0kb downstream 7589 true scaffold_6: 4720327-4727915 Capsella rubella
Carub.0006s1272 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4720327-4725326 Capsella rubella
Carub.0006s1272 10.0kb upstream 10.0kb upstream 12589 true scaffold_6: 4725327-4737915 Capsella rubella
Carub.0006s1272 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4727916-4737915 Capsella rubella
Carub.0006s1272 10.0kb downstream 10.0kb downstream 12589 true scaffold_6: 4715327-4727915 Capsella rubella
Carub.0006s1272 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4715327-4725326 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378366 5261 Brassicaceae View MSA
123829411 5264 Brassicales-Malvales View MSA
124346083 5266 SBM View MSA
124245870 5268 Malvidae View MSA
124072607 5270 Rosid View MSA
123737243 5271 Pentapetalae View MSA
122792477 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain