Gene : Carub.0007s2859 C. rubella v1.1
Defline:  (1 of 247) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  2859
Name:  ? Carub.0007s2859 Secondary Identifier:  ? PAC:39235615
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2859 0.5kb upstream 0.5kb upstream 1459 true scaffold_7: 10940572-10942030 Capsella rubella
Carub.0007s2859 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10941531-10942030 Capsella rubella
Carub.0007s2859 0.5kb downstream 0.5kb downstream 1459 true scaffold_7: 10940072-10941530 Capsella rubella
Carub.0007s2859 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10940072-10940571 Capsella rubella
Carub.0007s2859 1.0kb upstream 1.0kb upstream 1959 true scaffold_7: 10940572-10942530 Capsella rubella
Carub.0007s2859 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10941531-10942530 Capsella rubella
Carub.0007s2859 1.0kb downstream 1.0kb downstream 1959 true scaffold_7: 10939572-10941530 Capsella rubella
Carub.0007s2859 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10939572-10940571 Capsella rubella
Carub.0007s2859 2.0kb upstream 2.0kb upstream 2959 true scaffold_7: 10940572-10943530 Capsella rubella
Carub.0007s2859 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10941531-10943530 Capsella rubella
Carub.0007s2859 2.0kb downstream 2.0kb downstream 2959 true scaffold_7: 10938572-10941530 Capsella rubella
Carub.0007s2859 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10938572-10940571 Capsella rubella
Carub.0007s2859 5.0kb upstream 5.0kb upstream 5959 true scaffold_7: 10940572-10946530 Capsella rubella
Carub.0007s2859 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10941531-10946530 Capsella rubella
Carub.0007s2859 5.0kb downstream 5.0kb downstream 5959 true scaffold_7: 10935572-10941530 Capsella rubella
Carub.0007s2859 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10935572-10940571 Capsella rubella
Carub.0007s2859 10.0kb upstream 10.0kb upstream 10959 true scaffold_7: 10940572-10951530 Capsella rubella
Carub.0007s2859 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10941531-10951530 Capsella rubella
Carub.0007s2859 10.0kb downstream 10.0kb downstream 10959 true scaffold_7: 10930572-10941530 Capsella rubella
Carub.0007s2859 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10930572-10940571 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377518 5261 Brassicaceae View MSA
123836416 5264 Brassicales-Malvales View MSA
124344427 5266 SBM View MSA
124249680 5268 Malvidae View MSA
124061793 5270 Rosid View MSA
123747878 5271 Pentapetalae View MSA
122791665 5272 Eudicot View MSA
122044174 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348177 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain