Gene : Carub.0007s2866 C. rubella v1.1

Defline:  (1 of 2) PTHR12570//PTHR12570:SF20 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F14O13 Genomic Order:  2866
Name:  ? Carub.0007s2866 Secondary Identifier:  ? PAC:39235490

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2866 0.5kb upstream 0.5kb upstream 2535 true scaffold_7: 10967777-10970311 Capsella rubella
Carub.0007s2866 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10967777-10968276 Capsella rubella
Carub.0007s2866 0.5kb downstream 0.5kb downstream 2535 true scaffold_7: 10968277-10970811 Capsella rubella
Carub.0007s2866 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10970312-10970811 Capsella rubella
Carub.0007s2866 1.0kb upstream 1.0kb upstream 3035 true scaffold_7: 10967277-10970311 Capsella rubella
Carub.0007s2866 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10967277-10968276 Capsella rubella
Carub.0007s2866 1.0kb downstream 1.0kb downstream 3035 true scaffold_7: 10968277-10971311 Capsella rubella
Carub.0007s2866 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10970312-10971311 Capsella rubella
Carub.0007s2866 2.0kb upstream 2.0kb upstream 4035 true scaffold_7: 10966277-10970311 Capsella rubella
Carub.0007s2866 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10966277-10968276 Capsella rubella
Carub.0007s2866 2.0kb downstream 2.0kb downstream 4035 true scaffold_7: 10968277-10972311 Capsella rubella
Carub.0007s2866 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10970312-10972311 Capsella rubella
Carub.0007s2866 5.0kb upstream 5.0kb upstream 7035 true scaffold_7: 10963277-10970311 Capsella rubella
Carub.0007s2866 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10963277-10968276 Capsella rubella
Carub.0007s2866 5.0kb downstream 5.0kb downstream 7035 true scaffold_7: 10968277-10975311 Capsella rubella
Carub.0007s2866 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10970312-10975311 Capsella rubella
Carub.0007s2866 10.0kb upstream 10.0kb upstream 12035 true scaffold_7: 10958277-10970311 Capsella rubella
Carub.0007s2866 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10958277-10968276 Capsella rubella
Carub.0007s2866 10.0kb downstream 10.0kb downstream 12035 true scaffold_7: 10968277-10980311 Capsella rubella
Carub.0007s2866 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10970312-10980311 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368401 5261 Brassicaceae View MSA
123838674 5264 Brassicales-Malvales View MSA
124339897 5266 SBM View MSA
124248760 5268 Malvidae View MSA
124075521 5270 Rosid View MSA
123745073 5271 Pentapetalae View MSA
122789394 5272 Eudicot View MSA
122049852 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain