Gene : Carub.0007s2386 C. rubella v1.1

Defline:  (1 of 4) K07874 - Ras-related protein Rab-1A (RAB1A) Genomic Order:  2386
Name:  ? Carub.0007s2386 Secondary Identifier:  ? PAC:39234654

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2386 0.5kb upstream 0.5kb upstream 2598 true scaffold_7: 9045209-9047806 Capsella rubella
Carub.0007s2386 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9045209-9045708 Capsella rubella
Carub.0007s2386 0.5kb downstream 0.5kb downstream 2598 true scaffold_7: 9045709-9048306 Capsella rubella
Carub.0007s2386 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9047807-9048306 Capsella rubella
Carub.0007s2386 1.0kb upstream 1.0kb upstream 3098 true scaffold_7: 9044709-9047806 Capsella rubella
Carub.0007s2386 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9044709-9045708 Capsella rubella
Carub.0007s2386 1.0kb downstream 1.0kb downstream 3098 true scaffold_7: 9045709-9048806 Capsella rubella
Carub.0007s2386 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9047807-9048806 Capsella rubella
Carub.0007s2386 2.0kb upstream 2.0kb upstream 4098 true scaffold_7: 9043709-9047806 Capsella rubella
Carub.0007s2386 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9043709-9045708 Capsella rubella
Carub.0007s2386 2.0kb downstream 2.0kb downstream 4098 true scaffold_7: 9045709-9049806 Capsella rubella
Carub.0007s2386 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9047807-9049806 Capsella rubella
Carub.0007s2386 5.0kb upstream 5.0kb upstream 7098 true scaffold_7: 9040709-9047806 Capsella rubella
Carub.0007s2386 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9040709-9045708 Capsella rubella
Carub.0007s2386 5.0kb downstream 5.0kb downstream 7098 true scaffold_7: 9045709-9052806 Capsella rubella
Carub.0007s2386 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9047807-9052806 Capsella rubella
Carub.0007s2386 10.0kb upstream 10.0kb upstream 12098 true scaffold_7: 9035709-9047806 Capsella rubella
Carub.0007s2386 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9035709-9045708 Capsella rubella
Carub.0007s2386 10.0kb downstream 10.0kb downstream 12098 true scaffold_7: 9045709-9057806 Capsella rubella
Carub.0007s2386 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9047807-9057806 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380578 5261 Brassicaceae View MSA
123841448 5264 Brassicales-Malvales View MSA
124322931 5266 SBM View MSA
124253991 5268 Malvidae View MSA
124067664 5270 Rosid View MSA
123751573 5271 Pentapetalae View MSA
122797177 5272 Eudicot View MSA
122049964 5273 Angiosperm View MSA
121344116 5274 Embryophyte View MSA
123426750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain