Gene : Carub.0007s2690 C. rubella v1.1

Defline:  (1 of 2) 1.13.11.29 - Stizolobate synthase Genomic Order:  2690
Name:  ? Carub.0007s2690 Secondary Identifier:  ? PAC:39234398

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2690 0.5kb upstream 0.5kb upstream 1811 true scaffold_7: 10259248-10261058 Capsella rubella
Carub.0007s2690 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10260559-10261058 Capsella rubella
Carub.0007s2690 0.5kb downstream 0.5kb downstream 1811 true scaffold_7: 10258748-10260558 Capsella rubella
Carub.0007s2690 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10258748-10259247 Capsella rubella
Carub.0007s2690 1.0kb upstream 1.0kb upstream 2311 true scaffold_7: 10259248-10261558 Capsella rubella
Carub.0007s2690 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10260559-10261558 Capsella rubella
Carub.0007s2690 1.0kb downstream 1.0kb downstream 2311 true scaffold_7: 10258248-10260558 Capsella rubella
Carub.0007s2690 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10258248-10259247 Capsella rubella
Carub.0007s2690 2.0kb upstream 2.0kb upstream 3311 true scaffold_7: 10259248-10262558 Capsella rubella
Carub.0007s2690 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10260559-10262558 Capsella rubella
Carub.0007s2690 2.0kb downstream 2.0kb downstream 3311 true scaffold_7: 10257248-10260558 Capsella rubella
Carub.0007s2690 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10257248-10259247 Capsella rubella
Carub.0007s2690 5.0kb upstream 5.0kb upstream 6311 true scaffold_7: 10259248-10265558 Capsella rubella
Carub.0007s2690 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10260559-10265558 Capsella rubella
Carub.0007s2690 5.0kb downstream 5.0kb downstream 6311 true scaffold_7: 10254248-10260558 Capsella rubella
Carub.0007s2690 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10254248-10259247 Capsella rubella
Carub.0007s2690 10.0kb upstream 10.0kb upstream 11311 true scaffold_7: 10259248-10270558 Capsella rubella
Carub.0007s2690 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10260559-10270558 Capsella rubella
Carub.0007s2690 10.0kb downstream 10.0kb downstream 11311 true scaffold_7: 10249248-10260558 Capsella rubella
Carub.0007s2690 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10249248-10259247 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335554 5261 Brassicaceae Singleton cluster - no MSA
123776317 5264 Brassicales-Malvales Singleton cluster - no MSA
124350722 5266 SBM View MSA
124250769 5268 Malvidae View MSA
124061164 5270 Rosid View MSA
123748112 5271 Pentapetalae View MSA
122788148 5272 Eudicot View MSA
122046323 5273 Angiosperm View MSA
121350065 5274 Embryophyte View MSA
123426386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain