Gene : Carub.0007s2719 C. rubella v1.1
Defline:  (1 of 2) 4.2.1.19 - Imidazoleglycerol-phosphate dehydratase Genomic Order:  2719
Name:  ? Carub.0007s2719 Secondary Identifier:  ? PAC:39232462
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella HISTSYN-PWY Capsella rubella pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2719 0.5kb upstream 0.5kb upstream 2387 true scaffold_7: 10374364-10376750 Capsella rubella
Carub.0007s2719 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10374364-10374863 Capsella rubella
Carub.0007s2719 0.5kb downstream 0.5kb downstream 2387 true scaffold_7: 10374864-10377250 Capsella rubella
Carub.0007s2719 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10376751-10377250 Capsella rubella
Carub.0007s2719 1.0kb upstream 1.0kb upstream 2887 true scaffold_7: 10373864-10376750 Capsella rubella
Carub.0007s2719 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10373864-10374863 Capsella rubella
Carub.0007s2719 1.0kb downstream 1.0kb downstream 2887 true scaffold_7: 10374864-10377750 Capsella rubella
Carub.0007s2719 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10376751-10377750 Capsella rubella
Carub.0007s2719 2.0kb upstream 2.0kb upstream 3887 true scaffold_7: 10372864-10376750 Capsella rubella
Carub.0007s2719 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10372864-10374863 Capsella rubella
Carub.0007s2719 2.0kb downstream 2.0kb downstream 3887 true scaffold_7: 10374864-10378750 Capsella rubella
Carub.0007s2719 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10376751-10378750 Capsella rubella
Carub.0007s2719 5.0kb upstream 5.0kb upstream 6887 true scaffold_7: 10369864-10376750 Capsella rubella
Carub.0007s2719 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10369864-10374863 Capsella rubella
Carub.0007s2719 5.0kb downstream 5.0kb downstream 6887 true scaffold_7: 10374864-10381750 Capsella rubella
Carub.0007s2719 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10376751-10381750 Capsella rubella
Carub.0007s2719 10.0kb upstream 10.0kb upstream 11887 true scaffold_7: 10364864-10376750 Capsella rubella
Carub.0007s2719 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10364864-10374863 Capsella rubella
Carub.0007s2719 10.0kb downstream 10.0kb downstream 11887 true scaffold_7: 10374864-10386750 Capsella rubella
Carub.0007s2719 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10376751-10386750 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378389 5261 Brassicaceae View MSA
123833237 5264 Brassicales-Malvales View MSA
124344750 5266 SBM View MSA
124241761 5268 Malvidae View MSA
124067658 5270 Rosid View MSA
123737408 5271 Pentapetalae View MSA
122786767 5272 Eudicot View MSA
122045110 5273 Angiosperm View MSA
121344413 5274 Embryophyte View MSA
123423926 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain