Gene : Carub.0007s2723 C. rubella v1.1
Defline:  (1 of 1) PTHR10314//PTHR10314:SF101 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2723
Name:  ? Carub.0007s2723 Secondary Identifier:  ? PAC:39234600
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CYSTSYN-PWY Capsella rubella pathologic  
Crubella PWY-6936 Capsella rubella pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2723 0.5kb upstream 0.5kb upstream 3063 true scaffold_7: 10385502-10388564 Capsella rubella
Carub.0007s2723 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10385502-10386001 Capsella rubella
Carub.0007s2723 0.5kb downstream 0.5kb downstream 3063 true scaffold_7: 10386002-10389064 Capsella rubella
Carub.0007s2723 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10388565-10389064 Capsella rubella
Carub.0007s2723 1.0kb upstream 1.0kb upstream 3563 true scaffold_7: 10385002-10388564 Capsella rubella
Carub.0007s2723 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10385002-10386001 Capsella rubella
Carub.0007s2723 1.0kb downstream 1.0kb downstream 3563 true scaffold_7: 10386002-10389564 Capsella rubella
Carub.0007s2723 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10388565-10389564 Capsella rubella
Carub.0007s2723 2.0kb upstream 2.0kb upstream 4563 true scaffold_7: 10384002-10388564 Capsella rubella
Carub.0007s2723 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10384002-10386001 Capsella rubella
Carub.0007s2723 2.0kb downstream 2.0kb downstream 4563 true scaffold_7: 10386002-10390564 Capsella rubella
Carub.0007s2723 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10388565-10390564 Capsella rubella
Carub.0007s2723 5.0kb upstream 5.0kb upstream 7563 true scaffold_7: 10381002-10388564 Capsella rubella
Carub.0007s2723 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10381002-10386001 Capsella rubella
Carub.0007s2723 5.0kb downstream 5.0kb downstream 7563 true scaffold_7: 10386002-10393564 Capsella rubella
Carub.0007s2723 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10388565-10393564 Capsella rubella
Carub.0007s2723 10.0kb upstream 10.0kb upstream 12563 true scaffold_7: 10376002-10388564 Capsella rubella
Carub.0007s2723 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10376002-10386001 Capsella rubella
Carub.0007s2723 10.0kb downstream 10.0kb downstream 12563 true scaffold_7: 10386002-10398564 Capsella rubella
Carub.0007s2723 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10388565-10398564 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368674 5261 Brassicaceae View MSA
123836685 5264 Brassicales-Malvales View MSA
124342961 5266 SBM View MSA
124246015 5268 Malvidae View MSA
124073485 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain