Gene : Carub.0006s1278 C. rubella v1.1
Defline:  (1 of 2) PTHR34132//PTHR34132:SF1 - FAMILY NOT NAMED // EMB|CAB87627.1 Genomic Order:  1278
Name:  ? Carub.0006s1278 Secondary Identifier:  ? PAC:39249623
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1278 0.5kb upstream 0.5kb upstream 743 true scaffold_6: 4748347-4749089 Capsella rubella
Carub.0006s1278 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4748347-4748846 Capsella rubella
Carub.0006s1278 0.5kb downstream 0.5kb downstream 743 true scaffold_6: 4748847-4749589 Capsella rubella
Carub.0006s1278 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4749090-4749589 Capsella rubella
Carub.0006s1278 1.0kb upstream 1.0kb upstream 1243 true scaffold_6: 4747847-4749089 Capsella rubella
Carub.0006s1278 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4747847-4748846 Capsella rubella
Carub.0006s1278 1.0kb downstream 1.0kb downstream 1243 true scaffold_6: 4748847-4750089 Capsella rubella
Carub.0006s1278 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4749090-4750089 Capsella rubella
Carub.0006s1278 2.0kb upstream 2.0kb upstream 2243 true scaffold_6: 4746847-4749089 Capsella rubella
Carub.0006s1278 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4746847-4748846 Capsella rubella
Carub.0006s1278 2.0kb downstream 2.0kb downstream 2243 true scaffold_6: 4748847-4751089 Capsella rubella
Carub.0006s1278 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4749090-4751089 Capsella rubella
Carub.0006s1278 5.0kb upstream 5.0kb upstream 5243 true scaffold_6: 4743847-4749089 Capsella rubella
Carub.0006s1278 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4743847-4748846 Capsella rubella
Carub.0006s1278 5.0kb downstream 5.0kb downstream 5243 true scaffold_6: 4748847-4754089 Capsella rubella
Carub.0006s1278 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4749090-4754089 Capsella rubella
Carub.0006s1278 10.0kb upstream 10.0kb upstream 10243 true scaffold_6: 4738847-4749089 Capsella rubella
Carub.0006s1278 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4738847-4748846 Capsella rubella
Carub.0006s1278 10.0kb downstream 10.0kb downstream 10243 true scaffold_6: 4748847-4759089 Capsella rubella
Carub.0006s1278 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4749090-4759089 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337937 5261 Brassicaceae View MSA
123778565 5264 Brassicales-Malvales View MSA
124276907 5266 SBM View MSA
124249886 5268 Malvidae View MSA
124067801 5270 Rosid View MSA
123745806 5271 Pentapetalae View MSA
122791718 5272 Eudicot View MSA
122044288 5273 Angiosperm View MSA
121345647 5274 Embryophyte View MSA
123380250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain