Gene : Carub.0006s1273 C. rubella v1.1
Defline:  (1 of 33) PF02485 - Core-2/I-Branching enzyme (Branch) Genomic Order:  1273
Name:  ? Carub.0006s1273 Secondary Identifier:  ? PAC:39246482
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1273 0.5kb upstream 0.5kb upstream 4116 true scaffold_6: 4729144-4733259 Capsella rubella
Carub.0006s1273 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4732760-4733259 Capsella rubella
Carub.0006s1273 0.5kb downstream 0.5kb downstream 4116 true scaffold_6: 4728644-4732759 Capsella rubella
Carub.0006s1273 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4728644-4729143 Capsella rubella
Carub.0006s1273 1.0kb upstream 1.0kb upstream 4616 true scaffold_6: 4729144-4733759 Capsella rubella
Carub.0006s1273 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4732760-4733759 Capsella rubella
Carub.0006s1273 1.0kb downstream 1.0kb downstream 4616 true scaffold_6: 4728144-4732759 Capsella rubella
Carub.0006s1273 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4728144-4729143 Capsella rubella
Carub.0006s1273 2.0kb upstream 2.0kb upstream 5616 true scaffold_6: 4729144-4734759 Capsella rubella
Carub.0006s1273 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4732760-4734759 Capsella rubella
Carub.0006s1273 2.0kb downstream 2.0kb downstream 5616 true scaffold_6: 4727144-4732759 Capsella rubella
Carub.0006s1273 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4727144-4729143 Capsella rubella
Carub.0006s1273 5.0kb upstream 5.0kb upstream 8616 true scaffold_6: 4729144-4737759 Capsella rubella
Carub.0006s1273 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4732760-4737759 Capsella rubella
Carub.0006s1273 5.0kb downstream 5.0kb downstream 8616 true scaffold_6: 4724144-4732759 Capsella rubella
Carub.0006s1273 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4724144-4729143 Capsella rubella
Carub.0006s1273 10.0kb upstream 10.0kb upstream 13616 true scaffold_6: 4729144-4742759 Capsella rubella
Carub.0006s1273 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4732760-4742759 Capsella rubella
Carub.0006s1273 10.0kb downstream 10.0kb downstream 13616 true scaffold_6: 4719144-4732759 Capsella rubella
Carub.0006s1273 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4719144-4729143 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372940 5261 Brassicaceae View MSA
123830712 5264 Brassicales-Malvales View MSA
124345200 5266 SBM View MSA
124249568 5268 Malvidae View MSA
124066667 5270 Rosid View MSA
123753722 5271 Pentapetalae View MSA
122788010 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain