Gene : Carub.0007s2514 C. rubella v1.1
Defline:  (1 of 41) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2514
Name:  ? Carub.0007s2514 Secondary Identifier:  ? PAC:39234578
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2514 0.5kb upstream 0.5kb upstream 3214 true scaffold_7: 9538581-9541794 Capsella rubella
Carub.0007s2514 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9541295-9541794 Capsella rubella
Carub.0007s2514 0.5kb downstream 0.5kb downstream 3214 true scaffold_7: 9538081-9541294 Capsella rubella
Carub.0007s2514 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9538081-9538580 Capsella rubella
Carub.0007s2514 1.0kb upstream 1.0kb upstream 3714 true scaffold_7: 9538581-9542294 Capsella rubella
Carub.0007s2514 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9541295-9542294 Capsella rubella
Carub.0007s2514 1.0kb downstream 1.0kb downstream 3714 true scaffold_7: 9537581-9541294 Capsella rubella
Carub.0007s2514 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9537581-9538580 Capsella rubella
Carub.0007s2514 2.0kb upstream 2.0kb upstream 4714 true scaffold_7: 9538581-9543294 Capsella rubella
Carub.0007s2514 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9541295-9543294 Capsella rubella
Carub.0007s2514 2.0kb downstream 2.0kb downstream 4714 true scaffold_7: 9536581-9541294 Capsella rubella
Carub.0007s2514 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9536581-9538580 Capsella rubella
Carub.0007s2514 5.0kb upstream 5.0kb upstream 7714 true scaffold_7: 9538581-9546294 Capsella rubella
Carub.0007s2514 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9541295-9546294 Capsella rubella
Carub.0007s2514 5.0kb downstream 5.0kb downstream 7714 true scaffold_7: 9533581-9541294 Capsella rubella
Carub.0007s2514 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9533581-9538580 Capsella rubella
Carub.0007s2514 10.0kb upstream 10.0kb upstream 12714 true scaffold_7: 9538581-9551294 Capsella rubella
Carub.0007s2514 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9541295-9551294 Capsella rubella
Carub.0007s2514 10.0kb downstream 10.0kb downstream 12714 true scaffold_7: 9528581-9541294 Capsella rubella
Carub.0007s2514 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9528581-9538580 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372528 5261 Brassicaceae View MSA
123839281 5264 Brassicales-Malvales View MSA
124340689 5266 SBM View MSA
124240130 5268 Malvidae View MSA
124064149 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain