Gene : Carub.0006s1302 C. rubella v1.1
Defline:  (1 of 2) PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Genomic Order:  1302
Name:  ? Carub.0006s1302 Secondary Identifier:  ? PAC:39246082
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1302 0.5kb upstream 0.5kb upstream 3709 true scaffold_6: 4843107-4846815 Capsella rubella
Carub.0006s1302 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4846316-4846815 Capsella rubella
Carub.0006s1302 0.5kb downstream 0.5kb downstream 3709 true scaffold_6: 4842607-4846315 Capsella rubella
Carub.0006s1302 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4842607-4843106 Capsella rubella
Carub.0006s1302 1.0kb upstream 1.0kb upstream 4209 true scaffold_6: 4843107-4847315 Capsella rubella
Carub.0006s1302 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4846316-4847315 Capsella rubella
Carub.0006s1302 1.0kb downstream 1.0kb downstream 4209 true scaffold_6: 4842107-4846315 Capsella rubella
Carub.0006s1302 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4842107-4843106 Capsella rubella
Carub.0006s1302 2.0kb upstream 2.0kb upstream 5209 true scaffold_6: 4843107-4848315 Capsella rubella
Carub.0006s1302 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4846316-4848315 Capsella rubella
Carub.0006s1302 2.0kb downstream 2.0kb downstream 5209 true scaffold_6: 4841107-4846315 Capsella rubella
Carub.0006s1302 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4841107-4843106 Capsella rubella
Carub.0006s1302 5.0kb upstream 5.0kb upstream 8209 true scaffold_6: 4843107-4851315 Capsella rubella
Carub.0006s1302 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4846316-4851315 Capsella rubella
Carub.0006s1302 5.0kb downstream 5.0kb downstream 8209 true scaffold_6: 4838107-4846315 Capsella rubella
Carub.0006s1302 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4838107-4843106 Capsella rubella
Carub.0006s1302 10.0kb upstream 10.0kb upstream 13209 true scaffold_6: 4843107-4856315 Capsella rubella
Carub.0006s1302 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4846316-4856315 Capsella rubella
Carub.0006s1302 10.0kb downstream 10.0kb downstream 13209 true scaffold_6: 4833107-4846315 Capsella rubella
Carub.0006s1302 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4833107-4843106 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041490 5273 Angiosperm View MSA
122367746 5261 Brassicaceae View MSA
123828768 5264 Brassicales-Malvales View MSA
124341644 5266 SBM View MSA
124252266 5268 Malvidae View MSA
124071726 5270 Rosid View MSA
123747107 5271 Pentapetalae View MSA
122792156 5272 Eudicot View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain