Gene : Carub.0007s2321 C. rubella v1.1
Defline:  (1 of 1) K12123 - phytochrome E (PHYE) Genomic Order:  2321
Name:  ? Carub.0007s2321 Secondary Identifier:  ? PAC:39235653
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2321 0.5kb upstream 0.5kb upstream 4681 true scaffold_7: 8768544-8773224 Capsella rubella
Carub.0007s2321 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8768544-8769043 Capsella rubella
Carub.0007s2321 0.5kb downstream 0.5kb downstream 4681 true scaffold_7: 8769044-8773724 Capsella rubella
Carub.0007s2321 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8773225-8773724 Capsella rubella
Carub.0007s2321 1.0kb upstream 1.0kb upstream 5181 true scaffold_7: 8768044-8773224 Capsella rubella
Carub.0007s2321 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8768044-8769043 Capsella rubella
Carub.0007s2321 1.0kb downstream 1.0kb downstream 5181 true scaffold_7: 8769044-8774224 Capsella rubella
Carub.0007s2321 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8773225-8774224 Capsella rubella
Carub.0007s2321 2.0kb upstream 2.0kb upstream 6181 true scaffold_7: 8767044-8773224 Capsella rubella
Carub.0007s2321 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8767044-8769043 Capsella rubella
Carub.0007s2321 2.0kb downstream 2.0kb downstream 6181 true scaffold_7: 8769044-8775224 Capsella rubella
Carub.0007s2321 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8773225-8775224 Capsella rubella
Carub.0007s2321 5.0kb upstream 5.0kb upstream 9181 true scaffold_7: 8764044-8773224 Capsella rubella
Carub.0007s2321 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8764044-8769043 Capsella rubella
Carub.0007s2321 5.0kb downstream 5.0kb downstream 9181 true scaffold_7: 8769044-8778224 Capsella rubella
Carub.0007s2321 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8773225-8778224 Capsella rubella
Carub.0007s2321 10.0kb upstream 10.0kb upstream 14181 true scaffold_7: 8759044-8773224 Capsella rubella
Carub.0007s2321 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8759044-8769043 Capsella rubella
Carub.0007s2321 10.0kb downstream 10.0kb downstream 14181 true scaffold_7: 8769044-8783224 Capsella rubella
Carub.0007s2321 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8773225-8783224 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376804 5261 Brassicaceae View MSA
123830507 5264 Brassicales-Malvales View MSA
124346494 5266 SBM View MSA
124244038 5268 Malvidae View MSA
124060770 5270 Rosid View MSA
123740006 5271 Pentapetalae View MSA
122797861 5272 Eudicot View MSA
122046644 5273 Angiosperm View MSA
121350342 5274 Embryophyte View MSA
123381687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain