Gene : Carub.0007s2227 C. rubella v1.1
Defline:  (1 of 5) PF06884 - Protein of unknown function (DUF1264) (DUF1264) Genomic Order:  2227
Name:  ? Carub.0007s2227 Secondary Identifier:  ? PAC:39232635
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2227 0.5kb upstream 0.5kb upstream 2226 true scaffold_7: 8430680-8432905 Capsella rubella
Carub.0007s2227 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8432406-8432905 Capsella rubella
Carub.0007s2227 0.5kb downstream 0.5kb downstream 2226 true scaffold_7: 8430180-8432405 Capsella rubella
Carub.0007s2227 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8430180-8430679 Capsella rubella
Carub.0007s2227 1.0kb upstream 1.0kb upstream 2726 true scaffold_7: 8430680-8433405 Capsella rubella
Carub.0007s2227 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8432406-8433405 Capsella rubella
Carub.0007s2227 1.0kb downstream 1.0kb downstream 2726 true scaffold_7: 8429680-8432405 Capsella rubella
Carub.0007s2227 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8429680-8430679 Capsella rubella
Carub.0007s2227 2.0kb upstream 2.0kb upstream 3726 true scaffold_7: 8430680-8434405 Capsella rubella
Carub.0007s2227 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8432406-8434405 Capsella rubella
Carub.0007s2227 2.0kb downstream 2.0kb downstream 3726 true scaffold_7: 8428680-8432405 Capsella rubella
Carub.0007s2227 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8428680-8430679 Capsella rubella
Carub.0007s2227 5.0kb upstream 5.0kb upstream 6726 true scaffold_7: 8430680-8437405 Capsella rubella
Carub.0007s2227 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8432406-8437405 Capsella rubella
Carub.0007s2227 5.0kb downstream 5.0kb downstream 6726 true scaffold_7: 8425680-8432405 Capsella rubella
Carub.0007s2227 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8425680-8430679 Capsella rubella
Carub.0007s2227 10.0kb upstream 10.0kb upstream 11726 true scaffold_7: 8430680-8442405 Capsella rubella
Carub.0007s2227 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8432406-8442405 Capsella rubella
Carub.0007s2227 10.0kb downstream 10.0kb downstream 11726 true scaffold_7: 8420680-8432405 Capsella rubella
Carub.0007s2227 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8420680-8430679 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373857 5261 Brassicaceae View MSA
123800636 5264 Brassicales-Malvales View MSA
124298028 5266 SBM View MSA
124149773 5268 Malvidae View MSA
124069550 5270 Rosid View MSA
123749042 5271 Pentapetalae View MSA
122790302 5272 Eudicot View MSA
122044029 5273 Angiosperm View MSA
121350968 5274 Embryophyte View MSA
123426811 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain