Gene : Carub.0007s2028 C. rubella v1.1
Defline:  (1 of 1) K12667 - oligosaccharyltransferase complex subunit delta (ribophorin II) (SWP1, RPN2) Genomic Order:  2028
Name:  ? Carub.0007s2028 Secondary Identifier:  ? PAC:39232074
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2028 0.5kb upstream 0.5kb upstream 5959 true scaffold_7: 7634529-7640487 Capsella rubella
Carub.0007s2028 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7639988-7640487 Capsella rubella
Carub.0007s2028 0.5kb downstream 0.5kb downstream 5959 true scaffold_7: 7634029-7639987 Capsella rubella
Carub.0007s2028 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7634029-7634528 Capsella rubella
Carub.0007s2028 1.0kb upstream 1.0kb upstream 6459 true scaffold_7: 7634529-7640987 Capsella rubella
Carub.0007s2028 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7639988-7640987 Capsella rubella
Carub.0007s2028 1.0kb downstream 1.0kb downstream 6459 true scaffold_7: 7633529-7639987 Capsella rubella
Carub.0007s2028 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7633529-7634528 Capsella rubella
Carub.0007s2028 2.0kb upstream 2.0kb upstream 7459 true scaffold_7: 7634529-7641987 Capsella rubella
Carub.0007s2028 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7639988-7641987 Capsella rubella
Carub.0007s2028 2.0kb downstream 2.0kb downstream 7459 true scaffold_7: 7632529-7639987 Capsella rubella
Carub.0007s2028 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7632529-7634528 Capsella rubella
Carub.0007s2028 5.0kb upstream 5.0kb upstream 10459 true scaffold_7: 7634529-7644987 Capsella rubella
Carub.0007s2028 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7639988-7644987 Capsella rubella
Carub.0007s2028 5.0kb downstream 5.0kb downstream 10459 true scaffold_7: 7629529-7639987 Capsella rubella
Carub.0007s2028 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7629529-7634528 Capsella rubella
Carub.0007s2028 10.0kb upstream 10.0kb upstream 15459 true scaffold_7: 7634529-7649987 Capsella rubella
Carub.0007s2028 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7639988-7649987 Capsella rubella
Carub.0007s2028 10.0kb downstream 10.0kb downstream 15459 true scaffold_7: 7624529-7639987 Capsella rubella
Carub.0007s2028 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7624529-7634528 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041028 5273 Angiosperm View MSA
122369226 5261 Brassicaceae View MSA
123830435 5264 Brassicales-Malvales View MSA
124341410 5266 SBM View MSA
124253073 5268 Malvidae View MSA
124066748 5270 Rosid View MSA
123737285 5271 Pentapetalae View MSA
122787550 5272 Eudicot View MSA
121344151 5274 Embryophyte View MSA
123379986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain