Gene : Carub.0006s1338 C. rubella v1.1
Defline:  (1 of 1) PTHR11831//PTHR11831:SF13 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1338
Name:  ? Carub.0006s1338 Secondary Identifier:  ? PAC:39247807
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1338 0.5kb upstream 0.5kb upstream 1984 true scaffold_6: 4984039-4986022 Capsella rubella
Carub.0006s1338 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4985523-4986022 Capsella rubella
Carub.0006s1338 0.5kb downstream 0.5kb downstream 1984 true scaffold_6: 4983539-4985522 Capsella rubella
Carub.0006s1338 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4983539-4984038 Capsella rubella
Carub.0006s1338 1.0kb upstream 1.0kb upstream 2484 true scaffold_6: 4984039-4986522 Capsella rubella
Carub.0006s1338 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4985523-4986522 Capsella rubella
Carub.0006s1338 1.0kb downstream 1.0kb downstream 2484 true scaffold_6: 4983039-4985522 Capsella rubella
Carub.0006s1338 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4983039-4984038 Capsella rubella
Carub.0006s1338 2.0kb upstream 2.0kb upstream 3484 true scaffold_6: 4984039-4987522 Capsella rubella
Carub.0006s1338 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4985523-4987522 Capsella rubella
Carub.0006s1338 2.0kb downstream 2.0kb downstream 3484 true scaffold_6: 4982039-4985522 Capsella rubella
Carub.0006s1338 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4982039-4984038 Capsella rubella
Carub.0006s1338 5.0kb upstream 5.0kb upstream 6484 true scaffold_6: 4984039-4990522 Capsella rubella
Carub.0006s1338 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4985523-4990522 Capsella rubella
Carub.0006s1338 5.0kb downstream 5.0kb downstream 6484 true scaffold_6: 4979039-4985522 Capsella rubella
Carub.0006s1338 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4979039-4984038 Capsella rubella
Carub.0006s1338 10.0kb upstream 10.0kb upstream 11484 true scaffold_6: 4984039-4995522 Capsella rubella
Carub.0006s1338 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4985523-4995522 Capsella rubella
Carub.0006s1338 10.0kb downstream 10.0kb downstream 11484 true scaffold_6: 4974039-4985522 Capsella rubella
Carub.0006s1338 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4974039-4984038 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361577 5261 Brassicaceae View MSA
123798203 5264 Brassicales-Malvales View MSA
124295874 5266 SBM View MSA
124253439 5268 Malvidae View MSA
124071399 5270 Rosid View MSA
123748066 5271 Pentapetalae View MSA
122790013 5272 Eudicot View MSA
122042868 5273 Angiosperm View MSA
121345250 5274 Embryophyte View MSA
123426931 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain