Gene : Carub.0007s2039 C. rubella v1.1
Defline:  (1 of 1) PTHR11214//PTHR11214:SF92 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 20-RELATED Genomic Order:  2039
Name:  ? Carub.0007s2039 Secondary Identifier:  ? PAC:39234237
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2039 0.5kb upstream 0.5kb upstream 4003 true scaffold_7: 7675630-7679632 Capsella rubella
Carub.0007s2039 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7679133-7679632 Capsella rubella
Carub.0007s2039 0.5kb downstream 0.5kb downstream 4003 true scaffold_7: 7675130-7679132 Capsella rubella
Carub.0007s2039 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7675130-7675629 Capsella rubella
Carub.0007s2039 1.0kb upstream 1.0kb upstream 4503 true scaffold_7: 7675630-7680132 Capsella rubella
Carub.0007s2039 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7679133-7680132 Capsella rubella
Carub.0007s2039 1.0kb downstream 1.0kb downstream 4503 true scaffold_7: 7674630-7679132 Capsella rubella
Carub.0007s2039 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7674630-7675629 Capsella rubella
Carub.0007s2039 2.0kb upstream 2.0kb upstream 5503 true scaffold_7: 7675630-7681132 Capsella rubella
Carub.0007s2039 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7679133-7681132 Capsella rubella
Carub.0007s2039 2.0kb downstream 2.0kb downstream 5503 true scaffold_7: 7673630-7679132 Capsella rubella
Carub.0007s2039 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7673630-7675629 Capsella rubella
Carub.0007s2039 5.0kb upstream 5.0kb upstream 8503 true scaffold_7: 7675630-7684132 Capsella rubella
Carub.0007s2039 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7679133-7684132 Capsella rubella
Carub.0007s2039 5.0kb downstream 5.0kb downstream 8503 true scaffold_7: 7670630-7679132 Capsella rubella
Carub.0007s2039 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7670630-7675629 Capsella rubella
Carub.0007s2039 10.0kb upstream 10.0kb upstream 13503 true scaffold_7: 7675630-7689132 Capsella rubella
Carub.0007s2039 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7679133-7689132 Capsella rubella
Carub.0007s2039 10.0kb downstream 10.0kb downstream 13503 true scaffold_7: 7665630-7679132 Capsella rubella
Carub.0007s2039 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7665630-7675629 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368972 5261 Brassicaceae View MSA
123833678 5264 Brassicales-Malvales View MSA
124337033 5266 SBM View MSA
124245371 5268 Malvidae View MSA
124064746 5270 Rosid View MSA
123750268 5271 Pentapetalae View MSA
122792852 5272 Eudicot View MSA
122049644 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain