Gene : Carub.0007s2050 C. rubella v1.1
Defline:  (1 of 1) 1.1.1.31 - 3-hydroxyisobutyrate dehydrogenase Genomic Order:  2050
Name:  ? Carub.0007s2050 Secondary Identifier:  ? PAC:39235037
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella VALDEG-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2050 0.5kb upstream 0.5kb upstream 3367 true scaffold_7: 7704784-7708150 Capsella rubella
Carub.0007s2050 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7704784-7705283 Capsella rubella
Carub.0007s2050 0.5kb downstream 0.5kb downstream 3367 true scaffold_7: 7705284-7708650 Capsella rubella
Carub.0007s2050 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7708151-7708650 Capsella rubella
Carub.0007s2050 1.0kb upstream 1.0kb upstream 3867 true scaffold_7: 7704284-7708150 Capsella rubella
Carub.0007s2050 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7704284-7705283 Capsella rubella
Carub.0007s2050 1.0kb downstream 1.0kb downstream 3867 true scaffold_7: 7705284-7709150 Capsella rubella
Carub.0007s2050 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7708151-7709150 Capsella rubella
Carub.0007s2050 2.0kb upstream 2.0kb upstream 4867 true scaffold_7: 7703284-7708150 Capsella rubella
Carub.0007s2050 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7703284-7705283 Capsella rubella
Carub.0007s2050 2.0kb downstream 2.0kb downstream 4867 true scaffold_7: 7705284-7710150 Capsella rubella
Carub.0007s2050 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7708151-7710150 Capsella rubella
Carub.0007s2050 5.0kb upstream 5.0kb upstream 7867 true scaffold_7: 7700284-7708150 Capsella rubella
Carub.0007s2050 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7700284-7705283 Capsella rubella
Carub.0007s2050 5.0kb downstream 5.0kb downstream 7867 true scaffold_7: 7705284-7713150 Capsella rubella
Carub.0007s2050 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7708151-7713150 Capsella rubella
Carub.0007s2050 10.0kb upstream 10.0kb upstream 12867 true scaffold_7: 7695284-7708150 Capsella rubella
Carub.0007s2050 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7695284-7705283 Capsella rubella
Carub.0007s2050 10.0kb downstream 10.0kb downstream 12867 true scaffold_7: 7705284-7718150 Capsella rubella
Carub.0007s2050 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7708151-7718150 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377505 5261 Brassicaceae View MSA
123831545 5264 Brassicales-Malvales View MSA
124341286 5266 SBM View MSA
124237017 5268 Malvidae View MSA
124062564 5270 Rosid View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain