Gene : Carub.0007s2078 C. rubella v1.1
Defline:  (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 Genomic Order:  2078
Name:  ? Carub.0007s2078 Secondary Identifier:  ? PAC:39232575
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2078 0.5kb upstream 0.5kb upstream 2793 true scaffold_7: 7818514-7821306 Capsella rubella
Carub.0007s2078 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7820807-7821306 Capsella rubella
Carub.0007s2078 0.5kb downstream 0.5kb downstream 2793 true scaffold_7: 7818014-7820806 Capsella rubella
Carub.0007s2078 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7818014-7818513 Capsella rubella
Carub.0007s2078 1.0kb upstream 1.0kb upstream 3293 true scaffold_7: 7818514-7821806 Capsella rubella
Carub.0007s2078 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7820807-7821806 Capsella rubella
Carub.0007s2078 1.0kb downstream 1.0kb downstream 3293 true scaffold_7: 7817514-7820806 Capsella rubella
Carub.0007s2078 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7817514-7818513 Capsella rubella
Carub.0007s2078 2.0kb upstream 2.0kb upstream 4293 true scaffold_7: 7818514-7822806 Capsella rubella
Carub.0007s2078 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7820807-7822806 Capsella rubella
Carub.0007s2078 2.0kb downstream 2.0kb downstream 4293 true scaffold_7: 7816514-7820806 Capsella rubella
Carub.0007s2078 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7816514-7818513 Capsella rubella
Carub.0007s2078 5.0kb upstream 5.0kb upstream 7293 true scaffold_7: 7818514-7825806 Capsella rubella
Carub.0007s2078 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7820807-7825806 Capsella rubella
Carub.0007s2078 5.0kb downstream 5.0kb downstream 7293 true scaffold_7: 7813514-7820806 Capsella rubella
Carub.0007s2078 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7813514-7818513 Capsella rubella
Carub.0007s2078 10.0kb upstream 10.0kb upstream 12293 true scaffold_7: 7818514-7830806 Capsella rubella
Carub.0007s2078 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7820807-7830806 Capsella rubella
Carub.0007s2078 10.0kb downstream 10.0kb downstream 12293 true scaffold_7: 7808514-7820806 Capsella rubella
Carub.0007s2078 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7808514-7818513 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375740 5261 Brassicaceae View MSA
123835854 5264 Brassicales-Malvales View MSA
124344171 5266 SBM View MSA
124253949 5268 Malvidae View MSA
124064125 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain