Gene : Carub.0007s2102 C. rubella v1.1
Defline:  (1 of 2) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Genomic Order:  2102
Name:  ? Carub.0007s2102 Secondary Identifier:  ? PAC:39232647
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2102 0.5kb upstream 0.5kb upstream 1665 true scaffold_7: 7930233-7931897 Capsella rubella
Carub.0007s2102 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7930233-7930732 Capsella rubella
Carub.0007s2102 0.5kb downstream 0.5kb downstream 1665 true scaffold_7: 7930733-7932397 Capsella rubella
Carub.0007s2102 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7931898-7932397 Capsella rubella
Carub.0007s2102 1.0kb upstream 1.0kb upstream 2165 true scaffold_7: 7929733-7931897 Capsella rubella
Carub.0007s2102 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7929733-7930732 Capsella rubella
Carub.0007s2102 1.0kb downstream 1.0kb downstream 2165 true scaffold_7: 7930733-7932897 Capsella rubella
Carub.0007s2102 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7931898-7932897 Capsella rubella
Carub.0007s2102 2.0kb upstream 2.0kb upstream 3165 true scaffold_7: 7928733-7931897 Capsella rubella
Carub.0007s2102 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7928733-7930732 Capsella rubella
Carub.0007s2102 2.0kb downstream 2.0kb downstream 3165 true scaffold_7: 7930733-7933897 Capsella rubella
Carub.0007s2102 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7931898-7933897 Capsella rubella
Carub.0007s2102 5.0kb upstream 5.0kb upstream 6165 true scaffold_7: 7925733-7931897 Capsella rubella
Carub.0007s2102 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7925733-7930732 Capsella rubella
Carub.0007s2102 5.0kb downstream 5.0kb downstream 6165 true scaffold_7: 7930733-7936897 Capsella rubella
Carub.0007s2102 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7931898-7936897 Capsella rubella
Carub.0007s2102 10.0kb upstream 10.0kb upstream 11165 true scaffold_7: 7920733-7931897 Capsella rubella
Carub.0007s2102 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7920733-7930732 Capsella rubella
Carub.0007s2102 10.0kb downstream 10.0kb downstream 11165 true scaffold_7: 7930733-7941897 Capsella rubella
Carub.0007s2102 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7931898-7941897 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343346 5261 Brassicaceae View MSA
123783578 5264 Brassicales-Malvales View MSA
124281802 5266 SBM View MSA
124136498 5268 Malvidae View MSA
124069228 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain