Gene : Carub.0007s2116 C. rubella v1.1
Defline:  (1 of 1) PTHR13355//PTHR13355:SF12 - GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE // GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) FAMILY PROTEIN Genomic Order:  2116
Name:  ? Carub.0007s2116 Secondary Identifier:  ? PAC:39234678
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella UDPNACETYLGALSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2116 0.5kb upstream 0.5kb upstream 2409 true scaffold_7: 7985514-7987922 Capsella rubella
Carub.0007s2116 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7985514-7986013 Capsella rubella
Carub.0007s2116 0.5kb downstream 0.5kb downstream 2409 true scaffold_7: 7986014-7988422 Capsella rubella
Carub.0007s2116 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7987923-7988422 Capsella rubella
Carub.0007s2116 1.0kb upstream 1.0kb upstream 2909 true scaffold_7: 7985014-7987922 Capsella rubella
Carub.0007s2116 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7985014-7986013 Capsella rubella
Carub.0007s2116 1.0kb downstream 1.0kb downstream 2909 true scaffold_7: 7986014-7988922 Capsella rubella
Carub.0007s2116 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7987923-7988922 Capsella rubella
Carub.0007s2116 2.0kb upstream 2.0kb upstream 3909 true scaffold_7: 7984014-7987922 Capsella rubella
Carub.0007s2116 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7984014-7986013 Capsella rubella
Carub.0007s2116 2.0kb downstream 2.0kb downstream 3909 true scaffold_7: 7986014-7989922 Capsella rubella
Carub.0007s2116 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7987923-7989922 Capsella rubella
Carub.0007s2116 5.0kb upstream 5.0kb upstream 6909 true scaffold_7: 7981014-7987922 Capsella rubella
Carub.0007s2116 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7981014-7986013 Capsella rubella
Carub.0007s2116 5.0kb downstream 5.0kb downstream 6909 true scaffold_7: 7986014-7992922 Capsella rubella
Carub.0007s2116 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7987923-7992922 Capsella rubella
Carub.0007s2116 10.0kb upstream 10.0kb upstream 11909 true scaffold_7: 7976014-7987922 Capsella rubella
Carub.0007s2116 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7976014-7986013 Capsella rubella
Carub.0007s2116 10.0kb downstream 10.0kb downstream 11909 true scaffold_7: 7986014-7997922 Capsella rubella
Carub.0007s2116 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7987923-7997922 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372897 5261 Brassicaceae View MSA
123830165 5264 Brassicales-Malvales View MSA
124344760 5266 SBM View MSA
124242306 5268 Malvidae View MSA
124063813 5270 Rosid View MSA
123749165 5271 Pentapetalae View MSA
122794919 5272 Eudicot View MSA
122047532 5273 Angiosperm View MSA
123428893 5275 Viridiplantae View MSA
121347611 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain