Gene : Carub.0007s2160 C. rubella v1.1

Defline:  (1 of 7) PTHR24078//PTHR24078:SF262 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  2160
Name:  ? Carub.0007s2160 Secondary Identifier:  ? PAC:39232491

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2160 0.5kb upstream 0.5kb upstream 1595 true scaffold_7: 8163545-8165139 Capsella rubella
Carub.0007s2160 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8164640-8165139 Capsella rubella
Carub.0007s2160 0.5kb downstream 0.5kb downstream 1595 true scaffold_7: 8163045-8164639 Capsella rubella
Carub.0007s2160 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8163045-8163544 Capsella rubella
Carub.0007s2160 1.0kb upstream 1.0kb upstream 2095 true scaffold_7: 8163545-8165639 Capsella rubella
Carub.0007s2160 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8164640-8165639 Capsella rubella
Carub.0007s2160 1.0kb downstream 1.0kb downstream 2095 true scaffold_7: 8162545-8164639 Capsella rubella
Carub.0007s2160 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8162545-8163544 Capsella rubella
Carub.0007s2160 2.0kb upstream 2.0kb upstream 3095 true scaffold_7: 8163545-8166639 Capsella rubella
Carub.0007s2160 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8164640-8166639 Capsella rubella
Carub.0007s2160 2.0kb downstream 2.0kb downstream 3095 true scaffold_7: 8161545-8164639 Capsella rubella
Carub.0007s2160 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8161545-8163544 Capsella rubella
Carub.0007s2160 5.0kb upstream 5.0kb upstream 6095 true scaffold_7: 8163545-8169639 Capsella rubella
Carub.0007s2160 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8164640-8169639 Capsella rubella
Carub.0007s2160 5.0kb downstream 5.0kb downstream 6095 true scaffold_7: 8158545-8164639 Capsella rubella
Carub.0007s2160 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8158545-8163544 Capsella rubella
Carub.0007s2160 10.0kb upstream 10.0kb upstream 11095 true scaffold_7: 8163545-8174639 Capsella rubella
Carub.0007s2160 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8164640-8174639 Capsella rubella
Carub.0007s2160 10.0kb downstream 10.0kb downstream 11095 true scaffold_7: 8153545-8164639 Capsella rubella
Carub.0007s2160 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8153545-8163544 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381668 5261 Brassicaceae View MSA
123803366 5264 Brassicales-Malvales View MSA
124300482 5266 SBM View MSA
124252437 5268 Malvidae View MSA
124073950 5270 Rosid View MSA
123751687 5271 Pentapetalae View MSA
122797232 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain