Gene : Carub.0007s1892 C. rubella v1.1
Defline:  (1 of 4) K12845 - U4/U6 small nuclear ribonucleoprotein SNU13 (SNU13, NHP2L) Genomic Order:  1892
Name:  ? Carub.0007s1892 Secondary Identifier:  ? PAC:39233633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1892 0.5kb upstream 0.5kb upstream 1653 true scaffold_7: 7109537-7111189 Capsella rubella
Carub.0007s1892 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7109537-7110036 Capsella rubella
Carub.0007s1892 0.5kb downstream 0.5kb downstream 1653 true scaffold_7: 7110037-7111689 Capsella rubella
Carub.0007s1892 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7111190-7111689 Capsella rubella
Carub.0007s1892 1.0kb upstream 1.0kb upstream 2153 true scaffold_7: 7109037-7111189 Capsella rubella
Carub.0007s1892 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7109037-7110036 Capsella rubella
Carub.0007s1892 1.0kb downstream 1.0kb downstream 2153 true scaffold_7: 7110037-7112189 Capsella rubella
Carub.0007s1892 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7111190-7112189 Capsella rubella
Carub.0007s1892 2.0kb upstream 2.0kb upstream 3153 true scaffold_7: 7108037-7111189 Capsella rubella
Carub.0007s1892 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7108037-7110036 Capsella rubella
Carub.0007s1892 2.0kb downstream 2.0kb downstream 3153 true scaffold_7: 7110037-7113189 Capsella rubella
Carub.0007s1892 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7111190-7113189 Capsella rubella
Carub.0007s1892 5.0kb upstream 5.0kb upstream 6153 true scaffold_7: 7105037-7111189 Capsella rubella
Carub.0007s1892 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7105037-7110036 Capsella rubella
Carub.0007s1892 5.0kb downstream 5.0kb downstream 6153 true scaffold_7: 7110037-7116189 Capsella rubella
Carub.0007s1892 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7111190-7116189 Capsella rubella
Carub.0007s1892 10.0kb upstream 10.0kb upstream 11153 true scaffold_7: 7100037-7111189 Capsella rubella
Carub.0007s1892 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7100037-7110036 Capsella rubella
Carub.0007s1892 10.0kb downstream 10.0kb downstream 11153 true scaffold_7: 7110037-7121189 Capsella rubella
Carub.0007s1892 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7111190-7121189 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381563 5261 Brassicaceae View MSA
123830295 5264 Brassicales-Malvales View MSA
124340254 5266 SBM View MSA
124248927 5268 Malvidae View MSA
124071487 5270 Rosid View MSA
123745089 5271 Pentapetalae View MSA
122792689 5272 Eudicot View MSA
122048288 5273 Angiosperm View MSA
121348705 5274 Embryophyte View MSA
123423886 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain