Gene : Carub.0007s1900 C. rubella v1.1
Defline:  (1 of 2) PTHR10655//PTHR10655:SF20 - LYSOPHOSPHOLIPASE-RELATED // CARBOXYLESTERASE Genomic Order:  1900
Name:  ? Carub.0007s1900 Secondary Identifier:  ? PAC:39234580
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6303 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1900 0.5kb upstream 0.5kb upstream 2206 true scaffold_7: 7132058-7134263 Capsella rubella
Carub.0007s1900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7132058-7132557 Capsella rubella
Carub.0007s1900 0.5kb downstream 0.5kb downstream 2206 true scaffold_7: 7132558-7134763 Capsella rubella
Carub.0007s1900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7134264-7134763 Capsella rubella
Carub.0007s1900 1.0kb upstream 1.0kb upstream 2706 true scaffold_7: 7131558-7134263 Capsella rubella
Carub.0007s1900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7131558-7132557 Capsella rubella
Carub.0007s1900 1.0kb downstream 1.0kb downstream 2706 true scaffold_7: 7132558-7135263 Capsella rubella
Carub.0007s1900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7134264-7135263 Capsella rubella
Carub.0007s1900 2.0kb upstream 2.0kb upstream 3706 true scaffold_7: 7130558-7134263 Capsella rubella
Carub.0007s1900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7130558-7132557 Capsella rubella
Carub.0007s1900 2.0kb downstream 2.0kb downstream 3706 true scaffold_7: 7132558-7136263 Capsella rubella
Carub.0007s1900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7134264-7136263 Capsella rubella
Carub.0007s1900 5.0kb upstream 5.0kb upstream 6706 true scaffold_7: 7127558-7134263 Capsella rubella
Carub.0007s1900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7127558-7132557 Capsella rubella
Carub.0007s1900 5.0kb downstream 5.0kb downstream 6706 true scaffold_7: 7132558-7139263 Capsella rubella
Carub.0007s1900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7134264-7139263 Capsella rubella
Carub.0007s1900 10.0kb upstream 10.0kb upstream 11706 true scaffold_7: 7122558-7134263 Capsella rubella
Carub.0007s1900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7122558-7132557 Capsella rubella
Carub.0007s1900 10.0kb downstream 10.0kb downstream 11706 true scaffold_7: 7132558-7144263 Capsella rubella
Carub.0007s1900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7134264-7144263 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338338 5261 Brassicaceae View MSA
123778926 5264 Brassicales-Malvales View MSA
124277260 5266 SBM View MSA
124132478 5268 Malvidae View MSA
124073611 5270 Rosid View MSA
123748884 5271 Pentapetalae View MSA
122786681 5272 Eudicot View MSA
122044912 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain