Gene : Carub.0007s1922 C. rubella v1.1
Defline:  (1 of 5) K00121 - S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase (frmA, ADH5, adhC) Genomic Order:  1922
Name:  ? Carub.0007s1922 Secondary Identifier:  ? PAC:39235497
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5486 Capsella rubella pathologic  
Crubella PWY-5751 Capsella rubella pathologic  
Crubella PWY-6333 Capsella rubella pathologic  
Crubella PWY66-21 Capsella rubella pathologic  
Crubella PWY66-389 Capsella rubella pathologic  
Crubella PWY-6802 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1922 0.5kb upstream 0.5kb upstream 6419 true scaffold_7: 7200538-7206956 Capsella rubella
Carub.0007s1922 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7200538-7201037 Capsella rubella
Carub.0007s1922 0.5kb downstream 0.5kb downstream 6419 true scaffold_7: 7201038-7207456 Capsella rubella
Carub.0007s1922 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7206957-7207456 Capsella rubella
Carub.0007s1922 1.0kb upstream 1.0kb upstream 6919 true scaffold_7: 7200038-7206956 Capsella rubella
Carub.0007s1922 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7200038-7201037 Capsella rubella
Carub.0007s1922 1.0kb downstream 1.0kb downstream 6919 true scaffold_7: 7201038-7207956 Capsella rubella
Carub.0007s1922 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7206957-7207956 Capsella rubella
Carub.0007s1922 2.0kb upstream 2.0kb upstream 7919 true scaffold_7: 7199038-7206956 Capsella rubella
Carub.0007s1922 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7199038-7201037 Capsella rubella
Carub.0007s1922 2.0kb downstream 2.0kb downstream 7919 true scaffold_7: 7201038-7208956 Capsella rubella
Carub.0007s1922 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7206957-7208956 Capsella rubella
Carub.0007s1922 5.0kb upstream 5.0kb upstream 10919 true scaffold_7: 7196038-7206956 Capsella rubella
Carub.0007s1922 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7196038-7201037 Capsella rubella
Carub.0007s1922 5.0kb downstream 5.0kb downstream 10919 true scaffold_7: 7201038-7211956 Capsella rubella
Carub.0007s1922 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7206957-7211956 Capsella rubella
Carub.0007s1922 10.0kb upstream 10.0kb upstream 15919 true scaffold_7: 7191038-7206956 Capsella rubella
Carub.0007s1922 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7191038-7201037 Capsella rubella
Carub.0007s1922 10.0kb downstream 10.0kb downstream 15919 true scaffold_7: 7201038-7216956 Capsella rubella
Carub.0007s1922 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7206957-7216956 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380818 5261 Brassicaceae View MSA
123839438 5264 Brassicales-Malvales View MSA
124339992 5266 SBM View MSA
124250138 5268 Malvidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain