Gene : Carub.0007s2144 C. rubella v1.1
Defline:  (1 of 2) 1.1.1.3//2.7.2.4 - Homoserine dehydrogenase // Aspartate kinase / Aspartokinase Genomic Order:  2144
Name:  ? Carub.0007s2144 Secondary Identifier:  ? PAC:39234976
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella HOMOSERSYN-PWY Capsella rubella pathologic  
Crubella PWY-3001 Capsella rubella pathologic  
Crubella PWY-5097 Capsella rubella pathologic  
Crubella PWY-724 Capsella rubella pathologic  
Crubella THRESYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2144 0.5kb upstream 0.5kb upstream 5314 true scaffold_7: 8095891-8101204 Capsella rubella
Carub.0007s2144 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8100705-8101204 Capsella rubella
Carub.0007s2144 0.5kb downstream 0.5kb downstream 5314 true scaffold_7: 8095391-8100704 Capsella rubella
Carub.0007s2144 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8095391-8095890 Capsella rubella
Carub.0007s2144 1.0kb upstream 1.0kb upstream 5814 true scaffold_7: 8095891-8101704 Capsella rubella
Carub.0007s2144 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8100705-8101704 Capsella rubella
Carub.0007s2144 1.0kb downstream 1.0kb downstream 5814 true scaffold_7: 8094891-8100704 Capsella rubella
Carub.0007s2144 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8094891-8095890 Capsella rubella
Carub.0007s2144 2.0kb upstream 2.0kb upstream 6814 true scaffold_7: 8095891-8102704 Capsella rubella
Carub.0007s2144 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8100705-8102704 Capsella rubella
Carub.0007s2144 2.0kb downstream 2.0kb downstream 6814 true scaffold_7: 8093891-8100704 Capsella rubella
Carub.0007s2144 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8093891-8095890 Capsella rubella
Carub.0007s2144 5.0kb upstream 5.0kb upstream 9814 true scaffold_7: 8095891-8105704 Capsella rubella
Carub.0007s2144 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8100705-8105704 Capsella rubella
Carub.0007s2144 5.0kb downstream 5.0kb downstream 9814 true scaffold_7: 8090891-8100704 Capsella rubella
Carub.0007s2144 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8090891-8095890 Capsella rubella
Carub.0007s2144 10.0kb upstream 10.0kb upstream 14814 true scaffold_7: 8095891-8110704 Capsella rubella
Carub.0007s2144 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8100705-8110704 Capsella rubella
Carub.0007s2144 10.0kb downstream 10.0kb downstream 14814 true scaffold_7: 8085891-8100704 Capsella rubella
Carub.0007s2144 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8085891-8095890 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360995 5261 Brassicaceae View MSA
123837065 5264 Brassicales-Malvales View MSA
124346025 5266 SBM View MSA
124243959 5268 Malvidae View MSA
124067286 5270 Rosid View MSA
123739285 5271 Pentapetalae View MSA
122788186 5272 Eudicot View MSA
122043013 5273 Angiosperm View MSA
121350238 5274 Embryophyte View MSA
123423775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain