Gene : Carub.0007s1977 C. rubella v1.1
Defline:  (1 of 1) PTHR31747:SF4 - PROTEIN LOL2 Genomic Order:  1977
Name:  ? Carub.0007s1977 Secondary Identifier:  ? PAC:39233151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1977 0.5kb upstream 0.5kb upstream 2153 true scaffold_7: 7409979-7412131 Capsella rubella
Carub.0007s1977 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7411632-7412131 Capsella rubella
Carub.0007s1977 0.5kb downstream 0.5kb downstream 2153 true scaffold_7: 7409479-7411631 Capsella rubella
Carub.0007s1977 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7409479-7409978 Capsella rubella
Carub.0007s1977 1.0kb upstream 1.0kb upstream 2653 true scaffold_7: 7409979-7412631 Capsella rubella
Carub.0007s1977 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7411632-7412631 Capsella rubella
Carub.0007s1977 1.0kb downstream 1.0kb downstream 2653 true scaffold_7: 7408979-7411631 Capsella rubella
Carub.0007s1977 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7408979-7409978 Capsella rubella
Carub.0007s1977 2.0kb upstream 2.0kb upstream 3653 true scaffold_7: 7409979-7413631 Capsella rubella
Carub.0007s1977 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7411632-7413631 Capsella rubella
Carub.0007s1977 2.0kb downstream 2.0kb downstream 3653 true scaffold_7: 7407979-7411631 Capsella rubella
Carub.0007s1977 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7407979-7409978 Capsella rubella
Carub.0007s1977 5.0kb upstream 5.0kb upstream 6653 true scaffold_7: 7409979-7416631 Capsella rubella
Carub.0007s1977 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7411632-7416631 Capsella rubella
Carub.0007s1977 5.0kb downstream 5.0kb downstream 6653 true scaffold_7: 7404979-7411631 Capsella rubella
Carub.0007s1977 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7404979-7409978 Capsella rubella
Carub.0007s1977 10.0kb upstream 10.0kb upstream 11653 true scaffold_7: 7409979-7421631 Capsella rubella
Carub.0007s1977 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7411632-7421631 Capsella rubella
Carub.0007s1977 10.0kb downstream 10.0kb downstream 11653 true scaffold_7: 7399979-7411631 Capsella rubella
Carub.0007s1977 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7399979-7409978 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121672848 5273 Angiosperm View MSA
122335452 5261 Brassicaceae Singleton cluster - no MSA
123776217 5264 Brassicales-Malvales Singleton cluster - no MSA
124274611 5266 SBM Singleton cluster - no MSA
124252712 5268 Malvidae View MSA
124069342 5270 Rosid View MSA
123627868 5271 Pentapetalae View MSA
122662207 5272 Eudicot View MSA
120944756 5274 Embryophyte View MSA
122985170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain