Gene : Carub.0006s1348 C. rubella v1.1
Defline:  (1 of 1) PTHR11615//PTHR11615:SF81 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 5 Genomic Order:  1348
Name:  ? Carub.0006s1348 Secondary Identifier:  ? PAC:39249423
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1348 0.5kb upstream 0.5kb upstream 1376 true scaffold_6: 5019330-5020705 Capsella rubella
Carub.0006s1348 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5019330-5019829 Capsella rubella
Carub.0006s1348 0.5kb downstream 0.5kb downstream 1376 true scaffold_6: 5019830-5021205 Capsella rubella
Carub.0006s1348 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5020706-5021205 Capsella rubella
Carub.0006s1348 1.0kb upstream 1.0kb upstream 1876 true scaffold_6: 5018830-5020705 Capsella rubella
Carub.0006s1348 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5018830-5019829 Capsella rubella
Carub.0006s1348 1.0kb downstream 1.0kb downstream 1876 true scaffold_6: 5019830-5021705 Capsella rubella
Carub.0006s1348 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5020706-5021705 Capsella rubella
Carub.0006s1348 2.0kb upstream 2.0kb upstream 2876 true scaffold_6: 5017830-5020705 Capsella rubella
Carub.0006s1348 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5017830-5019829 Capsella rubella
Carub.0006s1348 2.0kb downstream 2.0kb downstream 2876 true scaffold_6: 5019830-5022705 Capsella rubella
Carub.0006s1348 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5020706-5022705 Capsella rubella
Carub.0006s1348 5.0kb upstream 5.0kb upstream 5876 true scaffold_6: 5014830-5020705 Capsella rubella
Carub.0006s1348 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5014830-5019829 Capsella rubella
Carub.0006s1348 5.0kb downstream 5.0kb downstream 5876 true scaffold_6: 5019830-5025705 Capsella rubella
Carub.0006s1348 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5020706-5025705 Capsella rubella
Carub.0006s1348 10.0kb upstream 10.0kb upstream 10876 true scaffold_6: 5009830-5020705 Capsella rubella
Carub.0006s1348 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5009830-5019829 Capsella rubella
Carub.0006s1348 10.0kb downstream 10.0kb downstream 10876 true scaffold_6: 5019830-5030705 Capsella rubella
Carub.0006s1348 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5020706-5030705 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377129 5261 Brassicaceae View MSA
123839160 5264 Brassicales-Malvales View MSA
124340326 5266 SBM View MSA
124243979 5268 Malvidae View MSA
124050355 5270 Rosid View MSA
123746908 5271 Pentapetalae View MSA
122797470 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain