Gene : Carub.0007s1986 C. rubella v1.1
Defline:  (1 of 3) PTHR31140//PTHR31140:SF2 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VAL3 Genomic Order:  1986
Name:  ? Carub.0007s1986 Secondary Identifier:  ? PAC:39233193
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1986 0.5kb upstream 0.5kb upstream 6306 true scaffold_7: 7431908-7438213 Capsella rubella
Carub.0007s1986 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7437714-7438213 Capsella rubella
Carub.0007s1986 0.5kb downstream 0.5kb downstream 6306 true scaffold_7: 7431408-7437713 Capsella rubella
Carub.0007s1986 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7431408-7431907 Capsella rubella
Carub.0007s1986 1.0kb upstream 1.0kb upstream 6806 true scaffold_7: 7431908-7438713 Capsella rubella
Carub.0007s1986 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7437714-7438713 Capsella rubella
Carub.0007s1986 1.0kb downstream 1.0kb downstream 6806 true scaffold_7: 7430908-7437713 Capsella rubella
Carub.0007s1986 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7430908-7431907 Capsella rubella
Carub.0007s1986 2.0kb upstream 2.0kb upstream 7806 true scaffold_7: 7431908-7439713 Capsella rubella
Carub.0007s1986 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7437714-7439713 Capsella rubella
Carub.0007s1986 2.0kb downstream 2.0kb downstream 7806 true scaffold_7: 7429908-7437713 Capsella rubella
Carub.0007s1986 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7429908-7431907 Capsella rubella
Carub.0007s1986 5.0kb upstream 5.0kb upstream 10806 true scaffold_7: 7431908-7442713 Capsella rubella
Carub.0007s1986 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7437714-7442713 Capsella rubella
Carub.0007s1986 5.0kb downstream 5.0kb downstream 10806 true scaffold_7: 7426908-7437713 Capsella rubella
Carub.0007s1986 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7426908-7431907 Capsella rubella
Carub.0007s1986 10.0kb upstream 10.0kb upstream 15806 true scaffold_7: 7431908-7447713 Capsella rubella
Carub.0007s1986 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7437714-7447713 Capsella rubella
Carub.0007s1986 10.0kb downstream 10.0kb downstream 15806 true scaffold_7: 7421908-7437713 Capsella rubella
Carub.0007s1986 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7421908-7431907 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372184 5261 Brassicaceae View MSA
123841430 5264 Brassicales-Malvales View MSA
124347339 5266 SBM View MSA
124244571 5268 Malvidae View MSA
124061756 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain