Gene : Carub.0007s1995 C. rubella v1.1
Defline:  (1 of 6) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) Genomic Order:  1995
Name:  ? Carub.0007s1995 Secondary Identifier:  ? PAC:39232806
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7279 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1995 0.5kb upstream 0.5kb upstream 3533 true scaffold_7: 7474304-7477836 Capsella rubella
Carub.0007s1995 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7474304-7474803 Capsella rubella
Carub.0007s1995 0.5kb downstream 0.5kb downstream 3533 true scaffold_7: 7474804-7478336 Capsella rubella
Carub.0007s1995 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7477837-7478336 Capsella rubella
Carub.0007s1995 1.0kb upstream 1.0kb upstream 4033 true scaffold_7: 7473804-7477836 Capsella rubella
Carub.0007s1995 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7473804-7474803 Capsella rubella
Carub.0007s1995 1.0kb downstream 1.0kb downstream 4033 true scaffold_7: 7474804-7478836 Capsella rubella
Carub.0007s1995 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7477837-7478836 Capsella rubella
Carub.0007s1995 2.0kb upstream 2.0kb upstream 5033 true scaffold_7: 7472804-7477836 Capsella rubella
Carub.0007s1995 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7472804-7474803 Capsella rubella
Carub.0007s1995 2.0kb downstream 2.0kb downstream 5033 true scaffold_7: 7474804-7479836 Capsella rubella
Carub.0007s1995 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7477837-7479836 Capsella rubella
Carub.0007s1995 5.0kb upstream 5.0kb upstream 8033 true scaffold_7: 7469804-7477836 Capsella rubella
Carub.0007s1995 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7469804-7474803 Capsella rubella
Carub.0007s1995 5.0kb downstream 5.0kb downstream 8033 true scaffold_7: 7474804-7482836 Capsella rubella
Carub.0007s1995 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7477837-7482836 Capsella rubella
Carub.0007s1995 10.0kb upstream 10.0kb upstream 13033 true scaffold_7: 7464804-7477836 Capsella rubella
Carub.0007s1995 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7464804-7474803 Capsella rubella
Carub.0007s1995 10.0kb downstream 10.0kb downstream 13033 true scaffold_7: 7474804-7487836 Capsella rubella
Carub.0007s1995 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7477837-7487836 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377484 5261 Brassicaceae View MSA
123827857 5264 Brassicales-Malvales View MSA
124343190 5266 SBM View MSA
124243492 5268 Malvidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain