Gene : Carub.0006s1342 C. rubella v1.1
Defline:  (1 of 3) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  1342
Name:  ? Carub.0006s1342 Secondary Identifier:  ? PAC:39247787
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1342 0.5kb upstream 0.5kb upstream 3021 true scaffold_6: 4996173-4999193 Capsella rubella
Carub.0006s1342 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4996173-4996672 Capsella rubella
Carub.0006s1342 0.5kb downstream 0.5kb downstream 3021 true scaffold_6: 4996673-4999693 Capsella rubella
Carub.0006s1342 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4999194-4999693 Capsella rubella
Carub.0006s1342 1.0kb upstream 1.0kb upstream 3521 true scaffold_6: 4995673-4999193 Capsella rubella
Carub.0006s1342 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4995673-4996672 Capsella rubella
Carub.0006s1342 1.0kb downstream 1.0kb downstream 3521 true scaffold_6: 4996673-5000193 Capsella rubella
Carub.0006s1342 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4999194-5000193 Capsella rubella
Carub.0006s1342 2.0kb upstream 2.0kb upstream 4521 true scaffold_6: 4994673-4999193 Capsella rubella
Carub.0006s1342 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4994673-4996672 Capsella rubella
Carub.0006s1342 2.0kb downstream 2.0kb downstream 4521 true scaffold_6: 4996673-5001193 Capsella rubella
Carub.0006s1342 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4999194-5001193 Capsella rubella
Carub.0006s1342 5.0kb upstream 5.0kb upstream 7521 true scaffold_6: 4991673-4999193 Capsella rubella
Carub.0006s1342 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4991673-4996672 Capsella rubella
Carub.0006s1342 5.0kb downstream 5.0kb downstream 7521 true scaffold_6: 4996673-5004193 Capsella rubella
Carub.0006s1342 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4999194-5004193 Capsella rubella
Carub.0006s1342 10.0kb upstream 10.0kb upstream 12521 true scaffold_6: 4986673-4999193 Capsella rubella
Carub.0006s1342 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4986673-4996672 Capsella rubella
Carub.0006s1342 10.0kb downstream 10.0kb downstream 12521 true scaffold_6: 4996673-5009193 Capsella rubella
Carub.0006s1342 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4999194-5009193 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
122373832 5261 Brassicaceae View MSA
123839572 5264 Brassicales-Malvales View MSA
124349563 5266 SBM View MSA
124249048 5268 Malvidae View MSA
124072696 5270 Rosid View MSA
123745123 5271 Pentapetalae View MSA
122792939 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain