Gene : Carub.0007s2007 C. rubella v1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF112 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  2007
Name:  ? Carub.0007s2007 Secondary Identifier:  ? PAC:39232760
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2007 0.5kb upstream 0.5kb upstream 2078 true scaffold_7: 7561671-7563748 Capsella rubella
Carub.0007s2007 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7561671-7562170 Capsella rubella
Carub.0007s2007 0.5kb downstream 0.5kb downstream 2078 true scaffold_7: 7562171-7564248 Capsella rubella
Carub.0007s2007 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7563749-7564248 Capsella rubella
Carub.0007s2007 1.0kb upstream 1.0kb upstream 2578 true scaffold_7: 7561171-7563748 Capsella rubella
Carub.0007s2007 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7561171-7562170 Capsella rubella
Carub.0007s2007 1.0kb downstream 1.0kb downstream 2578 true scaffold_7: 7562171-7564748 Capsella rubella
Carub.0007s2007 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7563749-7564748 Capsella rubella
Carub.0007s2007 2.0kb upstream 2.0kb upstream 3578 true scaffold_7: 7560171-7563748 Capsella rubella
Carub.0007s2007 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7560171-7562170 Capsella rubella
Carub.0007s2007 2.0kb downstream 2.0kb downstream 3578 true scaffold_7: 7562171-7565748 Capsella rubella
Carub.0007s2007 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7563749-7565748 Capsella rubella
Carub.0007s2007 5.0kb upstream 5.0kb upstream 6578 true scaffold_7: 7557171-7563748 Capsella rubella
Carub.0007s2007 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7557171-7562170 Capsella rubella
Carub.0007s2007 5.0kb downstream 5.0kb downstream 6578 true scaffold_7: 7562171-7568748 Capsella rubella
Carub.0007s2007 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7563749-7568748 Capsella rubella
Carub.0007s2007 10.0kb upstream 10.0kb upstream 11578 true scaffold_7: 7552171-7563748 Capsella rubella
Carub.0007s2007 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7552171-7562170 Capsella rubella
Carub.0007s2007 10.0kb downstream 10.0kb downstream 11578 true scaffold_7: 7562171-7573748 Capsella rubella
Carub.0007s2007 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7563749-7573748 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367766 5261 Brassicaceae View MSA
123830469 5264 Brassicales-Malvales View MSA
124339779 5266 SBM View MSA
124237455 5268 Malvidae View MSA
124067004 5270 Rosid View MSA
123739822 5271 Pentapetalae View MSA
122791659 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain