Gene : Carub.0007s2019 C. rubella v1.1
Defline:  (1 of 1) 2.3.1.191 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase / UDP-3-O-acyl-glucosamine N-acyltransferase Genomic Order:  2019
Name:  ? Carub.0007s2019 Secondary Identifier:  ? PAC:39233027
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella NAGLIPASYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2019 0.5kb upstream 0.5kb upstream 3062 true scaffold_7: 7599314-7602375 Capsella rubella
Carub.0007s2019 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7599314-7599813 Capsella rubella
Carub.0007s2019 0.5kb downstream 0.5kb downstream 3062 true scaffold_7: 7599814-7602875 Capsella rubella
Carub.0007s2019 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7602376-7602875 Capsella rubella
Carub.0007s2019 1.0kb upstream 1.0kb upstream 3562 true scaffold_7: 7598814-7602375 Capsella rubella
Carub.0007s2019 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7598814-7599813 Capsella rubella
Carub.0007s2019 1.0kb downstream 1.0kb downstream 3562 true scaffold_7: 7599814-7603375 Capsella rubella
Carub.0007s2019 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7602376-7603375 Capsella rubella
Carub.0007s2019 2.0kb upstream 2.0kb upstream 4562 true scaffold_7: 7597814-7602375 Capsella rubella
Carub.0007s2019 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7597814-7599813 Capsella rubella
Carub.0007s2019 2.0kb downstream 2.0kb downstream 4562 true scaffold_7: 7599814-7604375 Capsella rubella
Carub.0007s2019 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7602376-7604375 Capsella rubella
Carub.0007s2019 5.0kb upstream 5.0kb upstream 7562 true scaffold_7: 7594814-7602375 Capsella rubella
Carub.0007s2019 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7594814-7599813 Capsella rubella
Carub.0007s2019 5.0kb downstream 5.0kb downstream 7562 true scaffold_7: 7599814-7607375 Capsella rubella
Carub.0007s2019 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7602376-7607375 Capsella rubella
Carub.0007s2019 10.0kb upstream 10.0kb upstream 12562 true scaffold_7: 7589814-7602375 Capsella rubella
Carub.0007s2019 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7589814-7599813 Capsella rubella
Carub.0007s2019 10.0kb downstream 10.0kb downstream 12562 true scaffold_7: 7599814-7612375 Capsella rubella
Carub.0007s2019 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7602376-7612375 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375764 5261 Brassicaceae View MSA
123829957 5264 Brassicales-Malvales View MSA
124341788 5266 SBM View MSA
124240703 5268 Malvidae View MSA
124065572 5270 Rosid View MSA
123744940 5271 Pentapetalae View MSA
122787532 5272 Eudicot View MSA
122047698 5273 Angiosperm View MSA
121346059 5274 Embryophyte View MSA
123380314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain