Gene : Carub.0006s1343 C. rubella v1.1
Defline:  (1 of 1) PTHR23076//PTHR23076:SF54 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC Genomic Order:  1343
Name:  ? Carub.0006s1343 Secondary Identifier:  ? PAC:39247162
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1343 0.5kb upstream 0.5kb upstream 3524 true scaffold_6: 4998577-5002100 Capsella rubella
Carub.0006s1343 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5001601-5002100 Capsella rubella
Carub.0006s1343 0.5kb downstream 0.5kb downstream 3524 true scaffold_6: 4998077-5001600 Capsella rubella
Carub.0006s1343 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4998077-4998576 Capsella rubella
Carub.0006s1343 1.0kb upstream 1.0kb upstream 4024 true scaffold_6: 4998577-5002600 Capsella rubella
Carub.0006s1343 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5001601-5002600 Capsella rubella
Carub.0006s1343 1.0kb downstream 1.0kb downstream 4024 true scaffold_6: 4997577-5001600 Capsella rubella
Carub.0006s1343 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4997577-4998576 Capsella rubella
Carub.0006s1343 2.0kb upstream 2.0kb upstream 5024 true scaffold_6: 4998577-5003600 Capsella rubella
Carub.0006s1343 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5001601-5003600 Capsella rubella
Carub.0006s1343 2.0kb downstream 2.0kb downstream 5024 true scaffold_6: 4996577-5001600 Capsella rubella
Carub.0006s1343 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4996577-4998576 Capsella rubella
Carub.0006s1343 5.0kb upstream 5.0kb upstream 8024 true scaffold_6: 4998577-5006600 Capsella rubella
Carub.0006s1343 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5001601-5006600 Capsella rubella
Carub.0006s1343 5.0kb downstream 5.0kb downstream 8024 true scaffold_6: 4993577-5001600 Capsella rubella
Carub.0006s1343 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4993577-4998576 Capsella rubella
Carub.0006s1343 10.0kb upstream 10.0kb upstream 13024 true scaffold_6: 4998577-5011600 Capsella rubella
Carub.0006s1343 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5001601-5011600 Capsella rubella
Carub.0006s1343 10.0kb downstream 10.0kb downstream 13024 true scaffold_6: 4988577-5001600 Capsella rubella
Carub.0006s1343 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4988577-4998576 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373182 5261 Brassicaceae View MSA
123835527 5264 Brassicales-Malvales View MSA
124340631 5266 SBM View MSA
124244574 5268 Malvidae View MSA
124066347 5270 Rosid View MSA
123741338 5271 Pentapetalae View MSA
122790774 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain