Gene : Carub.0006s3594 C. rubella v1.1
Defline:  (1 of 2) PTHR24093//PTHR24093:SF289 - FAMILY NOT NAMED // CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED Genomic Order:  3594
Name:  ? Carub.0006s3594 Secondary Identifier:  ? PAC:39248954
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3594 0.5kb upstream 0.5kb upstream 4305 true scaffold_6: 16131562-16135866 Capsella rubella
Carub.0006s3594 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16135367-16135866 Capsella rubella
Carub.0006s3594 0.5kb downstream 0.5kb downstream 4305 true scaffold_6: 16131062-16135366 Capsella rubella
Carub.0006s3594 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16131062-16131561 Capsella rubella
Carub.0006s3594 1.0kb upstream 1.0kb upstream 4805 true scaffold_6: 16131562-16136366 Capsella rubella
Carub.0006s3594 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16135367-16136366 Capsella rubella
Carub.0006s3594 1.0kb downstream 1.0kb downstream 4805 true scaffold_6: 16130562-16135366 Capsella rubella
Carub.0006s3594 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16130562-16131561 Capsella rubella
Carub.0006s3594 2.0kb upstream 2.0kb upstream 5805 true scaffold_6: 16131562-16137366 Capsella rubella
Carub.0006s3594 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16135367-16137366 Capsella rubella
Carub.0006s3594 2.0kb downstream 2.0kb downstream 5805 true scaffold_6: 16129562-16135366 Capsella rubella
Carub.0006s3594 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16129562-16131561 Capsella rubella
Carub.0006s3594 5.0kb upstream 5.0kb upstream 8805 true scaffold_6: 16131562-16140366 Capsella rubella
Carub.0006s3594 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16135367-16140366 Capsella rubella
Carub.0006s3594 5.0kb downstream 5.0kb downstream 8805 true scaffold_6: 16126562-16135366 Capsella rubella
Carub.0006s3594 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16126562-16131561 Capsella rubella
Carub.0006s3594 10.0kb upstream 10.0kb upstream 13805 true scaffold_6: 16131562-16145366 Capsella rubella
Carub.0006s3594 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16135367-16145366 Capsella rubella
Carub.0006s3594 10.0kb downstream 10.0kb downstream 13805 true scaffold_6: 16121562-16135366 Capsella rubella
Carub.0006s3594 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16121562-16131561 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370910 5261 Brassicaceae View MSA
123837198 5264 Brassicales-Malvales View MSA
124345345 5266 SBM View MSA
124251610 5268 Malvidae View MSA
124070166 5270 Rosid View MSA
123740324 5271 Pentapetalae View MSA
122794495 5272 Eudicot View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain