Gene : Carub.0006s1601 C. rubella v1.1
Defline:  (1 of 6) 2.3.1.12 - Dihydrolipoyllysine-residue acetyltransferase / Transacetylase X Genomic Order:  1601
Name:  ? Carub.0006s1601 Secondary Identifier:  ? PAC:39248253
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5173 Capsella rubella pathologic  
Crubella PWY-5464 Capsella rubella pathologic  
Crubella PYRUVDEHYD-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1601 0.5kb upstream 0.5kb upstream 2148 true scaffold_6: 5912152-5914299 Capsella rubella
Carub.0006s1601 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5913800-5914299 Capsella rubella
Carub.0006s1601 0.5kb downstream 0.5kb downstream 2148 true scaffold_6: 5911652-5913799 Capsella rubella
Carub.0006s1601 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5911652-5912151 Capsella rubella
Carub.0006s1601 1.0kb upstream 1.0kb upstream 2648 true scaffold_6: 5912152-5914799 Capsella rubella
Carub.0006s1601 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5913800-5914799 Capsella rubella
Carub.0006s1601 1.0kb downstream 1.0kb downstream 2648 true scaffold_6: 5911152-5913799 Capsella rubella
Carub.0006s1601 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5911152-5912151 Capsella rubella
Carub.0006s1601 2.0kb upstream 2.0kb upstream 3648 true scaffold_6: 5912152-5915799 Capsella rubella
Carub.0006s1601 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5913800-5915799 Capsella rubella
Carub.0006s1601 2.0kb downstream 2.0kb downstream 3648 true scaffold_6: 5910152-5913799 Capsella rubella
Carub.0006s1601 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5910152-5912151 Capsella rubella
Carub.0006s1601 5.0kb upstream 5.0kb upstream 6648 true scaffold_6: 5912152-5918799 Capsella rubella
Carub.0006s1601 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5913800-5918799 Capsella rubella
Carub.0006s1601 5.0kb downstream 5.0kb downstream 6648 true scaffold_6: 5907152-5913799 Capsella rubella
Carub.0006s1601 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5907152-5912151 Capsella rubella
Carub.0006s1601 10.0kb upstream 10.0kb upstream 11648 true scaffold_6: 5912152-5923799 Capsella rubella
Carub.0006s1601 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5913800-5923799 Capsella rubella
Carub.0006s1601 10.0kb downstream 10.0kb downstream 11648 true scaffold_6: 5902152-5913799 Capsella rubella
Carub.0006s1601 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5902152-5912151 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371700 5261 Brassicaceae View MSA
123838380 5264 Brassicales-Malvales View MSA
124343466 5266 SBM View MSA
124244385 5268 Malvidae View MSA
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain