Gene : Carub.0006s3605 C. rubella v1.1
Defline:  (1 of 7) PTHR10217//PTHR10217:SF465 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Genomic Order:  3605
Name:  ? Carub.0006s3605 Secondary Identifier:  ? PAC:39248046
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3605 0.5kb upstream 0.5kb upstream 3445 true scaffold_6: 16178864-16182308 Capsella rubella
Carub.0006s3605 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16181809-16182308 Capsella rubella
Carub.0006s3605 0.5kb downstream 0.5kb downstream 3445 true scaffold_6: 16178364-16181808 Capsella rubella
Carub.0006s3605 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16178364-16178863 Capsella rubella
Carub.0006s3605 1.0kb upstream 1.0kb upstream 3945 true scaffold_6: 16178864-16182808 Capsella rubella
Carub.0006s3605 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16181809-16182808 Capsella rubella
Carub.0006s3605 1.0kb downstream 1.0kb downstream 3945 true scaffold_6: 16177864-16181808 Capsella rubella
Carub.0006s3605 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16177864-16178863 Capsella rubella
Carub.0006s3605 2.0kb upstream 2.0kb upstream 4945 true scaffold_6: 16178864-16183808 Capsella rubella
Carub.0006s3605 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16181809-16183808 Capsella rubella
Carub.0006s3605 2.0kb downstream 2.0kb downstream 4945 true scaffold_6: 16176864-16181808 Capsella rubella
Carub.0006s3605 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16176864-16178863 Capsella rubella
Carub.0006s3605 5.0kb upstream 5.0kb upstream 7945 true scaffold_6: 16178864-16186808 Capsella rubella
Carub.0006s3605 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16181809-16186808 Capsella rubella
Carub.0006s3605 5.0kb downstream 5.0kb downstream 7945 true scaffold_6: 16173864-16181808 Capsella rubella
Carub.0006s3605 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16173864-16178863 Capsella rubella
Carub.0006s3605 10.0kb upstream 10.0kb upstream 12945 true scaffold_6: 16178864-16191808 Capsella rubella
Carub.0006s3605 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16181809-16191808 Capsella rubella
Carub.0006s3605 10.0kb downstream 10.0kb downstream 12945 true scaffold_6: 16168864-16181808 Capsella rubella
Carub.0006s3605 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16168864-16178863 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362950 5261 Brassicaceae View MSA
123838813 5264 Brassicales-Malvales View MSA
124348165 5266 SBM View MSA
124239659 5268 Malvidae View MSA
124050847 5270 Rosid View MSA
123745876 5271 Pentapetalae View MSA
122785866 5272 Eudicot View MSA
122044448 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain