Gene : Carub.0006s3623 C. rubella v1.1
Defline:  (1 of 2) KOG0229 - Phosphatidylinositol-4-phosphate 5-kinase Genomic Order:  3623
Name:  ? Carub.0006s3623 Secondary Identifier:  ? PAC:39246969
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6352 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3623 0.5kb upstream 0.5kb upstream 2515 true scaffold_6: 16230245-16232759 Capsella rubella
Carub.0006s3623 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16232260-16232759 Capsella rubella
Carub.0006s3623 0.5kb downstream 0.5kb downstream 2515 true scaffold_6: 16229745-16232259 Capsella rubella
Carub.0006s3623 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16229745-16230244 Capsella rubella
Carub.0006s3623 1.0kb upstream 1.0kb upstream 3015 true scaffold_6: 16230245-16233259 Capsella rubella
Carub.0006s3623 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16232260-16233259 Capsella rubella
Carub.0006s3623 1.0kb downstream 1.0kb downstream 3015 true scaffold_6: 16229245-16232259 Capsella rubella
Carub.0006s3623 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16229245-16230244 Capsella rubella
Carub.0006s3623 2.0kb upstream 2.0kb upstream 4015 true scaffold_6: 16230245-16234259 Capsella rubella
Carub.0006s3623 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16232260-16234259 Capsella rubella
Carub.0006s3623 2.0kb downstream 2.0kb downstream 4015 true scaffold_6: 16228245-16232259 Capsella rubella
Carub.0006s3623 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16228245-16230244 Capsella rubella
Carub.0006s3623 5.0kb upstream 5.0kb upstream 7015 true scaffold_6: 16230245-16237259 Capsella rubella
Carub.0006s3623 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16232260-16237259 Capsella rubella
Carub.0006s3623 5.0kb downstream 5.0kb downstream 7015 true scaffold_6: 16225245-16232259 Capsella rubella
Carub.0006s3623 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16225245-16230244 Capsella rubella
Carub.0006s3623 10.0kb upstream 10.0kb upstream 12015 true scaffold_6: 16230245-16242259 Capsella rubella
Carub.0006s3623 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16232260-16242259 Capsella rubella
Carub.0006s3623 10.0kb downstream 10.0kb downstream 12015 true scaffold_6: 16220245-16232259 Capsella rubella
Carub.0006s3623 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16220245-16230244 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027967 5273 Angiosperm View MSA
122371912 5261 Brassicaceae View MSA
123800257 5264 Brassicales-Malvales View MSA
124297693 5266 SBM View MSA
124250315 5268 Malvidae View MSA
124037204 5270 Rosid View MSA
123741083 5271 Pentapetalae View MSA
122791627 5272 Eudicot View MSA
121349579 5274 Embryophyte View MSA
123428114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain