Gene : Carub.0006s3120 C. rubella v1.1
Defline:  (1 of 2) PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  3120
Name:  ? Carub.0006s3120 Secondary Identifier:  ? PAC:39246238
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3120 0.5kb upstream 0.5kb upstream 2707 true scaffold_6: 14136664-14139370 Capsella rubella
Carub.0006s3120 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14136664-14137163 Capsella rubella
Carub.0006s3120 0.5kb downstream 0.5kb downstream 2707 true scaffold_6: 14137164-14139870 Capsella rubella
Carub.0006s3120 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14139371-14139870 Capsella rubella
Carub.0006s3120 1.0kb upstream 1.0kb upstream 3207 true scaffold_6: 14136164-14139370 Capsella rubella
Carub.0006s3120 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14136164-14137163 Capsella rubella
Carub.0006s3120 1.0kb downstream 1.0kb downstream 3207 true scaffold_6: 14137164-14140370 Capsella rubella
Carub.0006s3120 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14139371-14140370 Capsella rubella
Carub.0006s3120 2.0kb upstream 2.0kb upstream 4207 true scaffold_6: 14135164-14139370 Capsella rubella
Carub.0006s3120 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14135164-14137163 Capsella rubella
Carub.0006s3120 2.0kb downstream 2.0kb downstream 4207 true scaffold_6: 14137164-14141370 Capsella rubella
Carub.0006s3120 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14139371-14141370 Capsella rubella
Carub.0006s3120 5.0kb upstream 5.0kb upstream 7207 true scaffold_6: 14132164-14139370 Capsella rubella
Carub.0006s3120 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14132164-14137163 Capsella rubella
Carub.0006s3120 5.0kb downstream 5.0kb downstream 7207 true scaffold_6: 14137164-14144370 Capsella rubella
Carub.0006s3120 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14139371-14144370 Capsella rubella
Carub.0006s3120 10.0kb upstream 10.0kb upstream 12207 true scaffold_6: 14127164-14139370 Capsella rubella
Carub.0006s3120 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14127164-14137163 Capsella rubella
Carub.0006s3120 10.0kb downstream 10.0kb downstream 12207 true scaffold_6: 14137164-14149370 Capsella rubella
Carub.0006s3120 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14139371-14149370 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372299 5261 Brassicaceae View MSA
123841387 5264 Brassicales-Malvales View MSA
124348766 5266 SBM View MSA
124248140 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain