Gene : Carub.0006s3139 C. rubella v1.1
Defline:  (1 of 2) PTHR10638:SF39 - AMINE OXIDASE-RELATED Genomic Order:  3139
Name:  ? Carub.0006s3139 Secondary Identifier:  ? PAC:39248802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5751 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3139 0.5kb upstream 0.5kb upstream 3427 true scaffold_6: 14224957-14228383 Capsella rubella
Carub.0006s3139 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14224957-14225456 Capsella rubella
Carub.0006s3139 0.5kb downstream 0.5kb downstream 3427 true scaffold_6: 14225457-14228883 Capsella rubella
Carub.0006s3139 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14228384-14228883 Capsella rubella
Carub.0006s3139 1.0kb upstream 1.0kb upstream 3927 true scaffold_6: 14224457-14228383 Capsella rubella
Carub.0006s3139 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14224457-14225456 Capsella rubella
Carub.0006s3139 1.0kb downstream 1.0kb downstream 3927 true scaffold_6: 14225457-14229383 Capsella rubella
Carub.0006s3139 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14228384-14229383 Capsella rubella
Carub.0006s3139 2.0kb upstream 2.0kb upstream 4927 true scaffold_6: 14223457-14228383 Capsella rubella
Carub.0006s3139 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14223457-14225456 Capsella rubella
Carub.0006s3139 2.0kb downstream 2.0kb downstream 4927 true scaffold_6: 14225457-14230383 Capsella rubella
Carub.0006s3139 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14228384-14230383 Capsella rubella
Carub.0006s3139 5.0kb upstream 5.0kb upstream 7927 true scaffold_6: 14220457-14228383 Capsella rubella
Carub.0006s3139 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14220457-14225456 Capsella rubella
Carub.0006s3139 5.0kb downstream 5.0kb downstream 7927 true scaffold_6: 14225457-14233383 Capsella rubella
Carub.0006s3139 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14228384-14233383 Capsella rubella
Carub.0006s3139 10.0kb upstream 10.0kb upstream 12927 true scaffold_6: 14215457-14228383 Capsella rubella
Carub.0006s3139 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14215457-14225456 Capsella rubella
Carub.0006s3139 10.0kb downstream 10.0kb downstream 12927 true scaffold_6: 14225457-14238383 Capsella rubella
Carub.0006s3139 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14228384-14238383 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368678 5261 Brassicaceae View MSA
123832890 5264 Brassicales-Malvales View MSA
124342730 5266 SBM View MSA
124239487 5268 Malvidae View MSA
124066432 5270 Rosid View MSA
123751770 5271 Pentapetalae View MSA
122795506 5272 Eudicot View MSA
122049910 5273 Angiosperm View MSA
123428923 5275 Viridiplantae View MSA
121349913 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain