Gene : Carub.0006s3179 C. rubella v1.1
Defline:  (1 of 30) PF00234 - Protease inhibitor/seed storage/LTP family (Tryp_alpha_amyl) Genomic Order:  3179
Name:  ? Carub.0006s3179 Secondary Identifier:  ? PAC:39247277
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3179 0.5kb upstream 0.5kb upstream 833 true scaffold_6: 14420741-14421573 Capsella rubella
Carub.0006s3179 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14420741-14421240 Capsella rubella
Carub.0006s3179 0.5kb downstream 0.5kb downstream 833 true scaffold_6: 14421241-14422073 Capsella rubella
Carub.0006s3179 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14421574-14422073 Capsella rubella
Carub.0006s3179 1.0kb upstream 1.0kb upstream 1333 true scaffold_6: 14420241-14421573 Capsella rubella
Carub.0006s3179 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14420241-14421240 Capsella rubella
Carub.0006s3179 1.0kb downstream 1.0kb downstream 1333 true scaffold_6: 14421241-14422573 Capsella rubella
Carub.0006s3179 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14421574-14422573 Capsella rubella
Carub.0006s3179 2.0kb upstream 2.0kb upstream 2333 true scaffold_6: 14419241-14421573 Capsella rubella
Carub.0006s3179 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14419241-14421240 Capsella rubella
Carub.0006s3179 2.0kb downstream 2.0kb downstream 2333 true scaffold_6: 14421241-14423573 Capsella rubella
Carub.0006s3179 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14421574-14423573 Capsella rubella
Carub.0006s3179 5.0kb upstream 5.0kb upstream 5333 true scaffold_6: 14416241-14421573 Capsella rubella
Carub.0006s3179 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14416241-14421240 Capsella rubella
Carub.0006s3179 5.0kb downstream 5.0kb downstream 5333 true scaffold_6: 14421241-14426573 Capsella rubella
Carub.0006s3179 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14421574-14426573 Capsella rubella
Carub.0006s3179 10.0kb upstream 10.0kb upstream 10333 true scaffold_6: 14411241-14421573 Capsella rubella
Carub.0006s3179 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14411241-14421240 Capsella rubella
Carub.0006s3179 10.0kb downstream 10.0kb downstream 10333 true scaffold_6: 14421241-14431573 Capsella rubella
Carub.0006s3179 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14421574-14431573 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381503 5261 Brassicaceae View MSA
123841900 5264 Brassicales-Malvales View MSA
124352038 5266 SBM View MSA
124253928 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain