Gene : Carub.0006s3423 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3423
Name:  ? Carub.0006s3423 Secondary Identifier:  ? PAC:39248672
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3423 0.5kb upstream 0.5kb upstream 2576 true scaffold_6: 15403822-15406397 Capsella rubella
Carub.0006s3423 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15405898-15406397 Capsella rubella
Carub.0006s3423 0.5kb downstream 0.5kb downstream 2576 true scaffold_6: 15403322-15405897 Capsella rubella
Carub.0006s3423 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15403322-15403821 Capsella rubella
Carub.0006s3423 1.0kb upstream 1.0kb upstream 3076 true scaffold_6: 15403822-15406897 Capsella rubella
Carub.0006s3423 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15405898-15406897 Capsella rubella
Carub.0006s3423 1.0kb downstream 1.0kb downstream 3076 true scaffold_6: 15402822-15405897 Capsella rubella
Carub.0006s3423 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15402822-15403821 Capsella rubella
Carub.0006s3423 2.0kb upstream 2.0kb upstream 4076 true scaffold_6: 15403822-15407897 Capsella rubella
Carub.0006s3423 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15405898-15407897 Capsella rubella
Carub.0006s3423 2.0kb downstream 2.0kb downstream 4076 true scaffold_6: 15401822-15405897 Capsella rubella
Carub.0006s3423 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15401822-15403821 Capsella rubella
Carub.0006s3423 5.0kb upstream 5.0kb upstream 7076 true scaffold_6: 15403822-15410897 Capsella rubella
Carub.0006s3423 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15405898-15410897 Capsella rubella
Carub.0006s3423 5.0kb downstream 5.0kb downstream 7076 true scaffold_6: 15398822-15405897 Capsella rubella
Carub.0006s3423 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15398822-15403821 Capsella rubella
Carub.0006s3423 10.0kb upstream 10.0kb upstream 12076 true scaffold_6: 15403822-15415897 Capsella rubella
Carub.0006s3423 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15405898-15415897 Capsella rubella
Carub.0006s3423 10.0kb downstream 10.0kb downstream 12076 true scaffold_6: 15393822-15405897 Capsella rubella
Carub.0006s3423 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15393822-15403821 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370210 5261 Brassicaceae View MSA
123833927 5264 Brassicales-Malvales View MSA
124339423 5266 SBM View MSA
124241200 5268 Malvidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain