Gene : Carub.0006s2670 C. rubella v1.1
Defline:  (1 of 1) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Genomic Order:  2670
Name:  ? Carub.0006s2670 Secondary Identifier:  ? PAC:39249168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2670 0.5kb upstream 0.5kb upstream 4175 true scaffold_6: 11769794-11773968 Capsella rubella
Carub.0006s2670 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 11773469-11773968 Capsella rubella
Carub.0006s2670 0.5kb downstream 0.5kb downstream 4175 true scaffold_6: 11769294-11773468 Capsella rubella
Carub.0006s2670 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 11769294-11769793 Capsella rubella
Carub.0006s2670 1.0kb upstream 1.0kb upstream 4675 true scaffold_6: 11769794-11774468 Capsella rubella
Carub.0006s2670 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 11773469-11774468 Capsella rubella
Carub.0006s2670 1.0kb downstream 1.0kb downstream 4675 true scaffold_6: 11768794-11773468 Capsella rubella
Carub.0006s2670 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 11768794-11769793 Capsella rubella
Carub.0006s2670 2.0kb upstream 2.0kb upstream 5675 true scaffold_6: 11769794-11775468 Capsella rubella
Carub.0006s2670 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 11773469-11775468 Capsella rubella
Carub.0006s2670 2.0kb downstream 2.0kb downstream 5675 true scaffold_6: 11767794-11773468 Capsella rubella
Carub.0006s2670 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 11767794-11769793 Capsella rubella
Carub.0006s2670 5.0kb upstream 5.0kb upstream 8675 true scaffold_6: 11769794-11778468 Capsella rubella
Carub.0006s2670 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 11773469-11778468 Capsella rubella
Carub.0006s2670 5.0kb downstream 5.0kb downstream 8675 true scaffold_6: 11764794-11773468 Capsella rubella
Carub.0006s2670 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 11764794-11769793 Capsella rubella
Carub.0006s2670 10.0kb upstream 10.0kb upstream 13675 true scaffold_6: 11769794-11783468 Capsella rubella
Carub.0006s2670 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 11773469-11783468 Capsella rubella
Carub.0006s2670 10.0kb downstream 10.0kb downstream 13675 true scaffold_6: 11759794-11773468 Capsella rubella
Carub.0006s2670 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 11759794-11769793 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364678 5261 Brassicaceae View MSA
123841434 5264 Brassicales-Malvales View MSA
124345663 5266 SBM View MSA
124248525 5268 Malvidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain