Gene : Carub.0006s2685 C. rubella v1.1
Defline:  (1 of 52) PF00892 - EamA-like transporter family (EamA) Genomic Order:  2685
Name:  ? Carub.0006s2685 Secondary Identifier:  ? PAC:39246943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2685 0.5kb upstream 0.5kb upstream 2663 true scaffold_6: 11951403-11954065 Capsella rubella
Carub.0006s2685 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 11951403-11951902 Capsella rubella
Carub.0006s2685 0.5kb downstream 0.5kb downstream 2663 true scaffold_6: 11951903-11954565 Capsella rubella
Carub.0006s2685 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 11954066-11954565 Capsella rubella
Carub.0006s2685 1.0kb upstream 1.0kb upstream 3163 true scaffold_6: 11950903-11954065 Capsella rubella
Carub.0006s2685 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 11950903-11951902 Capsella rubella
Carub.0006s2685 1.0kb downstream 1.0kb downstream 3163 true scaffold_6: 11951903-11955065 Capsella rubella
Carub.0006s2685 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 11954066-11955065 Capsella rubella
Carub.0006s2685 2.0kb upstream 2.0kb upstream 4163 true scaffold_6: 11949903-11954065 Capsella rubella
Carub.0006s2685 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 11949903-11951902 Capsella rubella
Carub.0006s2685 2.0kb downstream 2.0kb downstream 4163 true scaffold_6: 11951903-11956065 Capsella rubella
Carub.0006s2685 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 11954066-11956065 Capsella rubella
Carub.0006s2685 5.0kb upstream 5.0kb upstream 7163 true scaffold_6: 11946903-11954065 Capsella rubella
Carub.0006s2685 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 11946903-11951902 Capsella rubella
Carub.0006s2685 5.0kb downstream 5.0kb downstream 7163 true scaffold_6: 11951903-11959065 Capsella rubella
Carub.0006s2685 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 11954066-11959065 Capsella rubella
Carub.0006s2685 10.0kb upstream 10.0kb upstream 12163 true scaffold_6: 11941903-11954065 Capsella rubella
Carub.0006s2685 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 11941903-11951902 Capsella rubella
Carub.0006s2685 10.0kb downstream 10.0kb downstream 12163 true scaffold_6: 11951903-11964065 Capsella rubella
Carub.0006s2685 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 11954066-11964065 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365704 5261 Brassicaceae View MSA
123827338 5264 Brassicales-Malvales View MSA
124321458 5266 SBM View MSA
124241056 5268 Malvidae View MSA
124067340 5270 Rosid View MSA
123757589 5271 Pentapetalae View MSA
122796473 5272 Eudicot View MSA
122051256 5273 Angiosperm View MSA
121351883 5274 Embryophyte View MSA
123382389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain