Gene : Carub.0006s2737 C. rubella v1.1

Defline:  (1 of 2) PTHR24064//PTHR24064:SF279 - FAMILY NOT NAMED // MAJOR FACILITATOR PROTEIN-RELATED Genomic Order:  2737
Name:  ? Carub.0006s2737 Secondary Identifier:  ? PAC:39249542

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2737 0.5kb upstream 0.5kb upstream 2057 true scaffold_6: 12328073-12330129 Capsella rubella
Carub.0006s2737 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 12328073-12328572 Capsella rubella
Carub.0006s2737 0.5kb downstream 0.5kb downstream 2057 true scaffold_6: 12328573-12330629 Capsella rubella
Carub.0006s2737 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 12330130-12330629 Capsella rubella
Carub.0006s2737 1.0kb upstream 1.0kb upstream 2557 true scaffold_6: 12327573-12330129 Capsella rubella
Carub.0006s2737 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 12327573-12328572 Capsella rubella
Carub.0006s2737 1.0kb downstream 1.0kb downstream 2557 true scaffold_6: 12328573-12331129 Capsella rubella
Carub.0006s2737 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 12330130-12331129 Capsella rubella
Carub.0006s2737 2.0kb upstream 2.0kb upstream 3557 true scaffold_6: 12326573-12330129 Capsella rubella
Carub.0006s2737 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 12326573-12328572 Capsella rubella
Carub.0006s2737 2.0kb downstream 2.0kb downstream 3557 true scaffold_6: 12328573-12332129 Capsella rubella
Carub.0006s2737 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 12330130-12332129 Capsella rubella
Carub.0006s2737 5.0kb upstream 5.0kb upstream 6557 true scaffold_6: 12323573-12330129 Capsella rubella
Carub.0006s2737 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 12323573-12328572 Capsella rubella
Carub.0006s2737 5.0kb downstream 5.0kb downstream 6557 true scaffold_6: 12328573-12335129 Capsella rubella
Carub.0006s2737 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 12330130-12335129 Capsella rubella
Carub.0006s2737 10.0kb upstream 10.0kb upstream 11557 true scaffold_6: 12318573-12330129 Capsella rubella
Carub.0006s2737 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 12318573-12328572 Capsella rubella
Carub.0006s2737 10.0kb downstream 10.0kb downstream 11557 true scaffold_6: 12328573-12340129 Capsella rubella
Carub.0006s2737 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 12330130-12340129 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375969 5261 Brassicaceae View MSA
123842924 5264 Brassicales-Malvales View MSA
124323869 5266 SBM View MSA
124253137 5268 Malvidae View MSA
124069579 5270 Rosid View MSA
123750757 5271 Pentapetalae View MSA
122797214 5272 Eudicot View MSA
122045312 5273 Angiosperm View MSA
121348560 5274 Embryophyte View MSA
123428081 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain