Gene : Carub.0006s1648 C. rubella v1.1
Defline:  (1 of 1) K00965 - UDPglucose--hexose-1-phosphate uridylyltransferase (galT, GALT) Genomic Order:  1648
Name:  ? Carub.0006s1648 Secondary Identifier:  ? PAC:39247293
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3821 Capsella rubella pathologic  
Crubella PWY-6527 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1648 0.5kb upstream 0.5kb upstream 2016 true scaffold_6: 6063117-6065132 Capsella rubella
Carub.0006s1648 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6063117-6063616 Capsella rubella
Carub.0006s1648 0.5kb downstream 0.5kb downstream 2016 true scaffold_6: 6063617-6065632 Capsella rubella
Carub.0006s1648 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6065133-6065632 Capsella rubella
Carub.0006s1648 1.0kb upstream 1.0kb upstream 2516 true scaffold_6: 6062617-6065132 Capsella rubella
Carub.0006s1648 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6062617-6063616 Capsella rubella
Carub.0006s1648 1.0kb downstream 1.0kb downstream 2516 true scaffold_6: 6063617-6066132 Capsella rubella
Carub.0006s1648 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6065133-6066132 Capsella rubella
Carub.0006s1648 2.0kb upstream 2.0kb upstream 3516 true scaffold_6: 6061617-6065132 Capsella rubella
Carub.0006s1648 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6061617-6063616 Capsella rubella
Carub.0006s1648 2.0kb downstream 2.0kb downstream 3516 true scaffold_6: 6063617-6067132 Capsella rubella
Carub.0006s1648 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6065133-6067132 Capsella rubella
Carub.0006s1648 5.0kb upstream 5.0kb upstream 6516 true scaffold_6: 6058617-6065132 Capsella rubella
Carub.0006s1648 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6058617-6063616 Capsella rubella
Carub.0006s1648 5.0kb downstream 5.0kb downstream 6516 true scaffold_6: 6063617-6070132 Capsella rubella
Carub.0006s1648 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6065133-6070132 Capsella rubella
Carub.0006s1648 10.0kb upstream 10.0kb upstream 11516 true scaffold_6: 6053617-6065132 Capsella rubella
Carub.0006s1648 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6053617-6063616 Capsella rubella
Carub.0006s1648 10.0kb downstream 10.0kb downstream 11516 true scaffold_6: 6063617-6075132 Capsella rubella
Carub.0006s1648 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6065133-6075132 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372456 5261 Brassicaceae View MSA
123831342 5264 Brassicales-Malvales View MSA
124340520 5266 SBM View MSA
124240726 5268 Malvidae View MSA
124069087 5270 Rosid View MSA
123737596 5271 Pentapetalae View MSA
122790706 5272 Eudicot View MSA
122047985 5273 Angiosperm View MSA
121344081 5274 Embryophyte View MSA
123379971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain