Gene : Carub.0006s2779 C. rubella v1.1
Defline:  (1 of 5) PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED Genomic Order:  2779
Name:  ? Carub.0006s2779 Secondary Identifier:  ? PAC:39249958
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2779 0.5kb upstream 0.5kb upstream 2905 true scaffold_6: 12541303-12544207 Capsella rubella
Carub.0006s2779 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 12541303-12541802 Capsella rubella
Carub.0006s2779 0.5kb downstream 0.5kb downstream 2905 true scaffold_6: 12541803-12544707 Capsella rubella
Carub.0006s2779 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 12544208-12544707 Capsella rubella
Carub.0006s2779 1.0kb upstream 1.0kb upstream 3405 true scaffold_6: 12540803-12544207 Capsella rubella
Carub.0006s2779 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 12540803-12541802 Capsella rubella
Carub.0006s2779 1.0kb downstream 1.0kb downstream 3405 true scaffold_6: 12541803-12545207 Capsella rubella
Carub.0006s2779 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 12544208-12545207 Capsella rubella
Carub.0006s2779 2.0kb upstream 2.0kb upstream 4405 true scaffold_6: 12539803-12544207 Capsella rubella
Carub.0006s2779 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 12539803-12541802 Capsella rubella
Carub.0006s2779 2.0kb downstream 2.0kb downstream 4405 true scaffold_6: 12541803-12546207 Capsella rubella
Carub.0006s2779 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 12544208-12546207 Capsella rubella
Carub.0006s2779 5.0kb upstream 5.0kb upstream 7405 true scaffold_6: 12536803-12544207 Capsella rubella
Carub.0006s2779 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 12536803-12541802 Capsella rubella
Carub.0006s2779 5.0kb downstream 5.0kb downstream 7405 true scaffold_6: 12541803-12549207 Capsella rubella
Carub.0006s2779 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 12544208-12549207 Capsella rubella
Carub.0006s2779 10.0kb upstream 10.0kb upstream 12405 true scaffold_6: 12531803-12544207 Capsella rubella
Carub.0006s2779 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 12531803-12541802 Capsella rubella
Carub.0006s2779 10.0kb downstream 10.0kb downstream 12405 true scaffold_6: 12541803-12554207 Capsella rubella
Carub.0006s2779 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 12544208-12554207 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377378 5261 Brassicaceae View MSA
123834418 5264 Brassicales-Malvales View MSA
124343262 5266 SBM View MSA
124238615 5268 Malvidae View MSA
124073706 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain