Gene : Carub.0006s2782 C. rubella v1.1
Defline:  (1 of 63) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  2782
Name:  ? Carub.0006s2782 Secondary Identifier:  ? PAC:39248973
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2782 0.5kb upstream 0.5kb upstream 1126 true scaffold_6: 12553940-12555065 Capsella rubella
Carub.0006s2782 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 12553940-12554439 Capsella rubella
Carub.0006s2782 0.5kb downstream 0.5kb downstream 1126 true scaffold_6: 12554440-12555565 Capsella rubella
Carub.0006s2782 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 12555066-12555565 Capsella rubella
Carub.0006s2782 1.0kb upstream 1.0kb upstream 1626 true scaffold_6: 12553440-12555065 Capsella rubella
Carub.0006s2782 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 12553440-12554439 Capsella rubella
Carub.0006s2782 1.0kb downstream 1.0kb downstream 1626 true scaffold_6: 12554440-12556065 Capsella rubella
Carub.0006s2782 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 12555066-12556065 Capsella rubella
Carub.0006s2782 2.0kb upstream 2.0kb upstream 2626 true scaffold_6: 12552440-12555065 Capsella rubella
Carub.0006s2782 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 12552440-12554439 Capsella rubella
Carub.0006s2782 2.0kb downstream 2.0kb downstream 2626 true scaffold_6: 12554440-12557065 Capsella rubella
Carub.0006s2782 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 12555066-12557065 Capsella rubella
Carub.0006s2782 5.0kb upstream 5.0kb upstream 5626 true scaffold_6: 12549440-12555065 Capsella rubella
Carub.0006s2782 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 12549440-12554439 Capsella rubella
Carub.0006s2782 5.0kb downstream 5.0kb downstream 5626 true scaffold_6: 12554440-12560065 Capsella rubella
Carub.0006s2782 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 12555066-12560065 Capsella rubella
Carub.0006s2782 10.0kb upstream 10.0kb upstream 10626 true scaffold_6: 12544440-12555065 Capsella rubella
Carub.0006s2782 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 12544440-12554439 Capsella rubella
Carub.0006s2782 10.0kb downstream 10.0kb downstream 10626 true scaffold_6: 12554440-12565065 Capsella rubella
Carub.0006s2782 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 12555066-12565065 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380849 5261 Brassicaceae View MSA
123841044 5264 Brassicales-Malvales View MSA
124350139 5266 SBM View MSA
124245651 5268 Malvidae View MSA
124073165 5270 Rosid View MSA
123752373 5271 Pentapetalae View MSA
122797662 5272 Eudicot View MSA
122051357 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain