Gene : Carub.0006s2803 C. rubella v1.1

Defline:  (1 of 7) KOG3140 - Predicted membrane protein Genomic Order:  2803
Name:  ? Carub.0006s2803 Secondary Identifier:  ? PAC:39246386

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2803 0.5kb upstream 0.5kb upstream 2929 true scaffold_6: 12669106-12672034 Capsella rubella
Carub.0006s2803 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 12671535-12672034 Capsella rubella
Carub.0006s2803 0.5kb downstream 0.5kb downstream 2929 true scaffold_6: 12668606-12671534 Capsella rubella
Carub.0006s2803 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 12668606-12669105 Capsella rubella
Carub.0006s2803 1.0kb upstream 1.0kb upstream 3429 true scaffold_6: 12669106-12672534 Capsella rubella
Carub.0006s2803 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 12671535-12672534 Capsella rubella
Carub.0006s2803 1.0kb downstream 1.0kb downstream 3429 true scaffold_6: 12668106-12671534 Capsella rubella
Carub.0006s2803 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 12668106-12669105 Capsella rubella
Carub.0006s2803 2.0kb upstream 2.0kb upstream 4429 true scaffold_6: 12669106-12673534 Capsella rubella
Carub.0006s2803 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 12671535-12673534 Capsella rubella
Carub.0006s2803 2.0kb downstream 2.0kb downstream 4429 true scaffold_6: 12667106-12671534 Capsella rubella
Carub.0006s2803 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 12667106-12669105 Capsella rubella
Carub.0006s2803 5.0kb upstream 5.0kb upstream 7429 true scaffold_6: 12669106-12676534 Capsella rubella
Carub.0006s2803 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 12671535-12676534 Capsella rubella
Carub.0006s2803 5.0kb downstream 5.0kb downstream 7429 true scaffold_6: 12664106-12671534 Capsella rubella
Carub.0006s2803 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 12664106-12669105 Capsella rubella
Carub.0006s2803 10.0kb upstream 10.0kb upstream 12429 true scaffold_6: 12669106-12681534 Capsella rubella
Carub.0006s2803 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 12671535-12681534 Capsella rubella
Carub.0006s2803 10.0kb downstream 10.0kb downstream 12429 true scaffold_6: 12659106-12671534 Capsella rubella
Carub.0006s2803 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 12659106-12669105 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365308 5261 Brassicaceae View MSA
123837673 5264 Brassicales-Malvales View MSA
124343587 5266 SBM View MSA
124250786 5268 Malvidae View MSA
124063946 5270 Rosid View MSA
123748602 5271 Pentapetalae View MSA
122793245 5272 Eudicot View MSA
122048456 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain