Gene : Carub.0006s1667 C. rubella v1.1

Defline:  (1 of 1) K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Genomic Order:  1667
Name:  ? Carub.0006s1667 Secondary Identifier:  ? PAC:39248233

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1667 0.5kb upstream 0.5kb upstream 7900 true scaffold_6: 6133152-6141051 Capsella rubella
Carub.0006s1667 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6140552-6141051 Capsella rubella
Carub.0006s1667 0.5kb downstream 0.5kb downstream 7900 true scaffold_6: 6132652-6140551 Capsella rubella
Carub.0006s1667 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6132652-6133151 Capsella rubella
Carub.0006s1667 1.0kb upstream 1.0kb upstream 8400 true scaffold_6: 6133152-6141551 Capsella rubella
Carub.0006s1667 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6140552-6141551 Capsella rubella
Carub.0006s1667 1.0kb downstream 1.0kb downstream 8400 true scaffold_6: 6132152-6140551 Capsella rubella
Carub.0006s1667 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6132152-6133151 Capsella rubella
Carub.0006s1667 2.0kb upstream 2.0kb upstream 9400 true scaffold_6: 6133152-6142551 Capsella rubella
Carub.0006s1667 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6140552-6142551 Capsella rubella
Carub.0006s1667 2.0kb downstream 2.0kb downstream 9400 true scaffold_6: 6131152-6140551 Capsella rubella
Carub.0006s1667 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6131152-6133151 Capsella rubella
Carub.0006s1667 5.0kb upstream 5.0kb upstream 12400 true scaffold_6: 6133152-6145551 Capsella rubella
Carub.0006s1667 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6140552-6145551 Capsella rubella
Carub.0006s1667 5.0kb downstream 5.0kb downstream 12400 true scaffold_6: 6128152-6140551 Capsella rubella
Carub.0006s1667 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6128152-6133151 Capsella rubella
Carub.0006s1667 10.0kb upstream 10.0kb upstream 17400 true scaffold_6: 6133152-6150551 Capsella rubella
Carub.0006s1667 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6140552-6150551 Capsella rubella
Carub.0006s1667 10.0kb downstream 10.0kb downstream 17400 true scaffold_6: 6123152-6140551 Capsella rubella
Carub.0006s1667 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6123152-6133151 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047332 5273 Angiosperm View MSA
122369882 5261 Brassicaceae View MSA
123829275 5264 Brassicales-Malvales View MSA
124342049 5266 SBM View MSA
124242116 5268 Malvidae View MSA
124065928 5270 Rosid View MSA
123737090 5271 Pentapetalae View MSA
122792740 5272 Eudicot View MSA
121351207 5274 Embryophyte View MSA
123426816 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain