Gene : Carub.0006s2953 C. rubella v1.1
Defline:  (1 of 2) 4.1.2.53 - 2-keto-3-deoxy-L-rhamnonate aldolase / KDR aldolase Genomic Order:  2953
Name:  ? Carub.0006s2953 Secondary Identifier:  ? PAC:39246088
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2953 0.5kb upstream 0.5kb upstream 1580 true scaffold_6: 13401516-13403095 Capsella rubella
Carub.0006s2953 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13401516-13402015 Capsella rubella
Carub.0006s2953 0.5kb downstream 0.5kb downstream 1580 true scaffold_6: 13402016-13403595 Capsella rubella
Carub.0006s2953 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13403096-13403595 Capsella rubella
Carub.0006s2953 1.0kb upstream 1.0kb upstream 2080 true scaffold_6: 13401016-13403095 Capsella rubella
Carub.0006s2953 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13401016-13402015 Capsella rubella
Carub.0006s2953 1.0kb downstream 1.0kb downstream 2080 true scaffold_6: 13402016-13404095 Capsella rubella
Carub.0006s2953 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13403096-13404095 Capsella rubella
Carub.0006s2953 2.0kb upstream 2.0kb upstream 3080 true scaffold_6: 13400016-13403095 Capsella rubella
Carub.0006s2953 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13400016-13402015 Capsella rubella
Carub.0006s2953 2.0kb downstream 2.0kb downstream 3080 true scaffold_6: 13402016-13405095 Capsella rubella
Carub.0006s2953 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13403096-13405095 Capsella rubella
Carub.0006s2953 5.0kb upstream 5.0kb upstream 6080 true scaffold_6: 13397016-13403095 Capsella rubella
Carub.0006s2953 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13397016-13402015 Capsella rubella
Carub.0006s2953 5.0kb downstream 5.0kb downstream 6080 true scaffold_6: 13402016-13408095 Capsella rubella
Carub.0006s2953 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13403096-13408095 Capsella rubella
Carub.0006s2953 10.0kb upstream 10.0kb upstream 11080 true scaffold_6: 13392016-13403095 Capsella rubella
Carub.0006s2953 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13392016-13402015 Capsella rubella
Carub.0006s2953 10.0kb downstream 10.0kb downstream 11080 true scaffold_6: 13402016-13413095 Capsella rubella
Carub.0006s2953 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13403096-13413095 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374151 5261 Brassicaceae View MSA
123837747 5264 Brassicales-Malvales View MSA
124343254 5266 SBM View MSA
124249871 5268 Malvidae View MSA
124061282 5270 Rosid View MSA
123741108 5271 Pentapetalae View MSA
122791173 5272 Eudicot View MSA
122045726 5273 Angiosperm View MSA
121345930 5274 Embryophyte View MSA
123426145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain